DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPSQT
Uniprot ID:
Q9Y3C5
Source protein:
RING finger protein 11
Source gene:
RNF11
Class:
DEG_SCF_FBW7_1
Location:
51:56
E3 ligase:
FBXW7
DEGRON score:
0.9857
ASA_SCORE:
60.35
COIL:
0.6977
CONS_SCORE:
0.5188
DSS_SCORE:
0.6267
HELIX:
0.2775
FCONS_SCORE:
0.9857
RIG_SCORE:
0.6824
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S54R
TCGA-22-5481
LUSC
TCGA
PTPSQT
DEG_SCF_FBW7_1
0.7427
p.S54R
DO27160
LUSC
ICGC
PTPSQT
DEG_SCF_FBW7_1
0.7427
p.R57W
TCGA-AP-A059
UCEC
TCGA
PTPSQT
DEG_SCF_FBW7_1
0.3056
p.R57W
DO41361
UCEC
ICGC
PTPSQT
DEG_SCF_FBW7_1
0.3056
p.E42Q
TCGA-CV-7242
HNSC
TCGA
PTPSQT
DEG_SCF_FBW7_1
0.0833
p.E42Q
DO14974
HNSC
ICGC
PTPSQT
DEG_SCF_FBW7_1
0.0833
p.T56A
SIDM00537
Colorectal Carcinoma
GDSC
PTPSQT
DEG_SCF_FBW7_1
0.7139
p.T56A
ACH-000982
Colon/Colorectal Cancer
CCLE
PTPSQT
DEG_SCF_FBW7_1
0.7139
p.T56A
ACH-001345
Colon/Colorectal Cancer
CCLE
PTPSQT
DEG_SCF_FBW7_1
0.7139
p.T56A
GP5d
large_intestine
COSMIC
PTPSQT
DEG_SCF_FBW7_1
0.7139
Drug responses associated with RNF11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPSQT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y3C5
RING finger protein 11
DEG_SCF_FBW7_1
51:56
PTPSQT
FBXW7
0.9857
More...