DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPSVS
Uniprot ID:
Q96JM3
Source protein:
Chromosome alignment-maintaining phosphoprotein 1
Source gene:
CHAMP1
Class:
DEG_SCF_FBW7_1
Location:
361:366
E3 ligase:
FBXW7
DEGRON score:
0.9986
ASA_SCORE:
83.6
COIL:
0.9623
CONS_SCORE:
0.5779
DSS_SCORE:
0.4579
HELIX:
0.016
FCONS_SCORE:
0.8861
RIG_SCORE:
0.629
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S366Y
TCGA-AJ-A5DW
UCEC
TCGA
PTPSVS
DEG_SCF_FBW7_1
0.712
p.S366Y
DO50075
UCEC
ICGC
PTPSVS
DEG_SCF_FBW7_1
0.712
p.P352S
TCGA-D3-A51G
SKCM
TCGA
PTPSVS
DEG_SCF_FBW7_1
0.0833
p.P352S
DO47700
SKCM
ICGC
PTPSVS
DEG_SCF_FBW7_1
0.0833
p.P356S
TCGA-EE-A3JH
SKCM
TCGA
PTPSVS
DEG_SCF_FBW7_1
0.1944
p.P356S
DO47595
SKCM
ICGC
PTPSVS
DEG_SCF_FBW7_1
0.1944
p.P356L
TCGA-EE-A3JH
SKCM
TCGA
PTPSVS
DEG_SCF_FBW7_1
0.1944
p.P356L
DO47595
SKCM
ICGC
PTPSVS
DEG_SCF_FBW7_1
0.1944
p.S376L
SIDM01518
Oral Cavity Carcinoma
GDSC
PTPSVS
DEG_SCF_FBW7_1
0.5
p.I351V
ACH-002669
Colon/Colorectal Cancer
CCLE
PTPSVS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with CHAMP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPSVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JM3
Chromosome alignment-maintaining phosphoprotein 1
DEG_SCF_FBW7_1
361:366
PTPSVS
FBXW7
0.9986
More...