DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPTLE
Uniprot ID:
P98160
Source protein:
Basement membrane-specific heparan sulfate proteoglycan core protein
Source gene:
HSPG2
Class:
DEG_SCF_FBW7_2
Location:
1893:1898
E3 ligase:
FBXW7
DEGRON score:
0.7923
ASA_SCORE:
54.6
COIL:
0.4977
CONS_SCORE:
0.4396
DSS_SCORE:
0.6207
HELIX:
0.0067
FCONS_SCORE:
1.0235
RIG_SCORE:
0.6938
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1883V
TCGA-E7-A8O8
BLCA
TCGA
PTPTLE
DEG_SCF_FBW7_2
0.0556
p.A1883V
DO219020
BLCA
ICGC
PTPTLE
DEG_SCF_FBW7_2
0.0556
p.A1883V
SIDM00854
Burkitt's Lymphoma
GDSC
PTPTLE
DEG_SCF_FBW7_2
0.0556
p.A1883V
SIDM00828
Other Sarcomas
GDSC
PTPTLE
DEG_SCF_FBW7_2
0.0556
p.A1883V
SIDM01085
Bladder Carcinoma
GDSC
PTPTLE
DEG_SCF_FBW7_2
0.0556
p.T1894M
TCGA-OR-A5LK
ACC
TCGA
PTPTLE
DEG_SCF_FBW7_2
0.7423
p.A1889T
DO233823
GACA
ICGC
PTPTLE
DEG_SCF_FBW7_2
0.2222
p.Q1906K
DO229019
LICA
ICGC
PTPTLE
DEG_SCF_FBW7_2
0.1111
p.P1895T
DO229022
LICA
ICGC
PTPTLE
DEG_SCF_FBW7_2
0.7031
p.T1896N
DO229037
LICA
ICGC
PTPTLE
DEG_SCF_FBW7_2
0.5944
p.G1905N
DO222843
MELA
ICGC
PTPTLE
DEG_SCF_FBW7_2
0.1389
p.R1886C
SIDM01090
Colorectal Carcinoma
GDSC
PTPTLE
DEG_SCF_FBW7_2
0.1389
p.R1886C
RKO
large_intestine
COSMIC
PTPTLE
DEG_SCF_FBW7_2
0.1389
Drug responses associated with HSPG2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPTLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98160
Basement membrane-specific heparan sulfate proteoglycan core protein
DEG_SCF_FBW7_2
1893:1898
PTPTLE
FBXW7
0.7923
More...