DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPTPE
Uniprot ID:
P53814
Source protein:
Smoothelin
Source gene:
SMTN
Class:
DEG_SCF_FBW7_2
Location:
173:178
E3 ligase:
FBXW7
DEGRON score:
0.9102
ASA_SCORE:
100.6167
COIL:
0.9667
CONS_SCORE:
0.4146
DSS_SCORE:
0.7908
HELIX:
0.01
FCONS_SCORE:
1.0109
RIG_SCORE:
0.5665
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V187G
TCGA-BC-A3KF
LIHC
TCGA
PTPTPE
DEG_SCF_FBW7_2
0.0833
p.V187G
DO22990
LIHC
ICGC
PTPTPE
DEG_SCF_FBW7_2
0.0833
p.E169D
TCGA-CM-6674
COAD
TCGA
PTPTPE
DEG_SCF_FBW7_2
0.2222
p.E169D
DO10092
COAD
ICGC
PTPTPE
DEG_SCF_FBW7_2
0.2222
p.P177T
TCGA-D3-A3CE
SKCM
TCGA
PTPTPE
DEG_SCF_FBW7_2
0.5919
p.P177T
DO37405
SKCM
ICGC
PTPTPE
DEG_SCF_FBW7_2
0.5919
p.E178Q
SIDM00898
Breast Carcinoma
GDSC
PTPTPE
DEG_SCF_FBW7_2
0.6744
p.E178Q
AU565
breast
COSMIC
PTPTPE
DEG_SCF_FBW7_2
0.6744
p.R173W
SIDM00217
Colorectal Carcinoma
GDSC
PTPTPE
DEG_SCF_FBW7_2
0.8634
p.R173W
SNU-1040
large_intestine
COSMIC
PTPTPE
DEG_SCF_FBW7_2
0.8634
p.R171H
SIDM00125
Kidney Carcinoma
GDSC
PTPTPE
DEG_SCF_FBW7_2
0.2778
p.R171H
786-0
kidney
COSMIC
PTPTPE
DEG_SCF_FBW7_2
0.2778
p.T188A
ACH-000762
Head and Neck Cancer
CCLE
PTPTPE
DEG_SCF_FBW7_2
0.0556
p.V184G
ACH-001523
Skin Cancer
CCLE
PTPTPE
DEG_SCF_FBW7_2
0.1667
p.T174S
HuO-3N1
bone
COSMIC
PTPTPE
DEG_SCF_FBW7_2
0.7116
p.R174Q
KELLY
autonomic_ganglia
COSMIC
PTPTPE
DEG_SCF_FBW7_2
0.7329
p.R175W
SNU-1040
large_intestine
COSMIC
PTPTPE
DEG_SCF_FBW7_2
0.8634
p.R173H
786-0
kidney
COSMIC
PTPTPE
DEG_SCF_FBW7_2
0.8244
p.L182M
NCI-H1417
lung
COSMIC
PTPTPE
DEG_SCF_FBW7_2
0.2222
Drug responses associated with SMTN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPTPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P53814
Smoothelin
DEG_SCF_FBW7_2
173:178
PTPTPE
FBXW7
0.9102
More...