DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPTPKPS
Uniprot ID:
Q6Q4G3
Source protein:
Aminopeptidase Q
Source gene:
LVRN
Class:
DEG_SCF_FBW7_1
Location:
66:73
E3 ligase:
FBXW7
DEGRON score:
0.6471
ASA_SCORE:
97.45
COIL:
0.9566
CONS_SCORE:
0.3997
DSS_SCORE:
0.7617
HELIX:
0.0228
FCONS_SCORE:
1.0169
RIG_SCORE:
0.553
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R63S
SIDM01020
Plasma Cell Myeloma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00194
Colorectal Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00437
Acute Myeloid Leukemia
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00064
Hepatocellular Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00577
Neuroblastoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00463
T-Lymphoblastic Leukemia
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00369
Esophageal Squamous Cell Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00533
Pancreatic Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00040
Gastric Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM01196
Hepatocellular Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00606
Squamous Cell Lung Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00567
Other Solid Cancers
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00988
Kidney Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00241
Breast Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM01617
Endometrial Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM01578
Bladder Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00163
Biliary Tract Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM01729
Endometrial Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R76L
SIDM00770
Small Cell Lung Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R76L
NCI-H1836
lung
COSMIC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
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Drug responses associated with LVRN mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
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All proteins holding degron of PTPTPKPS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6Q4G3
Aminopeptidase Q
DEG_SCF_FBW7_1
66:73
PTPTPKPS
FBXW7
0.6471
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