DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPTPKPS
Uniprot ID:
Q6Q4G3
Source protein:
Aminopeptidase Q
Source gene:
LVRN
Class:
DEG_SCF_FBW7_1
Location:
66:73
E3 ligase:
FBXW7
DEGRON score:
0.6471
ASA_SCORE:
97.45
COIL:
0.9566
CONS_SCORE:
0.3997
DSS_SCORE:
0.7617
HELIX:
0.0228
FCONS_SCORE:
1.0169
RIG_SCORE:
0.553
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R63S
SIDM01020
Plasma Cell Myeloma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00194
Colorectal Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00437
Acute Myeloid Leukemia
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00064
Hepatocellular Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00577
Neuroblastoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00463
T-Lymphoblastic Leukemia
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00369
Esophageal Squamous Cell Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00533
Pancreatic Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00040
Gastric Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM01196
Hepatocellular Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00606
Squamous Cell Lung Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00567
Other Solid Cancers
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00988
Kidney Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00241
Breast Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM01617
Endometrial Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM01578
Bladder Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM00163
Biliary Tract Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R63S
SIDM01729
Endometrial Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R76L
SIDM00770
Small Cell Lung Carcinoma
GDSC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
p.R76L
NCI-H1836
lung
COSMIC
PTPTPKPS
DEG_SCF_FBW7_1
0.25
Drug responses associated with LVRN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPTPKPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6Q4G3
Aminopeptidase Q
DEG_SCF_FBW7_1
66:73
PTPTPKPS
FBXW7
0.6471
More...