DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPTPVLT
Uniprot ID:
P24043
Source protein:
Laminin subunit alpha-2
Source gene:
LAMA2
Class:
DEG_SCF_FBW7_1
Location:
2740:2747
E3 ligase:
FBXW7
DEGRON score:
0.9454
ASA_SCORE:
88.6375
COIL:
0.9344
CONS_SCORE:
0.2317
DSS_SCORE:
0.5934
HELIX:
0.0188
FCONS_SCORE:
0.8107
RIG_SCORE:
0.6897
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G2749S
TCGA-14-0781
GBM
TCGA
PTPTPVLT
DEG_SCF_FBW7_1
0.2778
p.G2749S
DO13905
GBM
ICGC
PTPTPVLT
DEG_SCF_FBW7_1
0.2778
p.E2754G
DO225330
BRCA
ICGC
PTPTPVLT
DEG_SCF_FBW7_1
0.1389
p.T2747A
DO229542
UTCA
ICGC
PTPTPVLT
DEG_SCF_FBW7_1
0.7139
p.P2731S
SIDM00660
Colorectal Carcinoma
GDSC
PTPTPVLT
DEG_SCF_FBW7_1
0.0833
p.P2731S
ACH-000985
Colon/Colorectal Cancer
CCLE
PTPTPVLT
DEG_SCF_FBW7_1
0.0833
p.P2731S
LS-411N
large_intestine
COSMIC
PTPTPVLT
DEG_SCF_FBW7_1
0.0833
p.T2743I
SIDM00951
T-Lymphoblastic Leukemia
GDSC
PTPTPVLT
DEG_SCF_FBW7_1
0.7078
p.T2743I
ACH-001737
Leukemia
CCLE
PTPTPVLT
DEG_SCF_FBW7_1
0.7078
p.T2743I
ACH-002222
Leukemia
CCLE
PTPTPVLT
DEG_SCF_FBW7_1
0.7078
p.T2743I
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PTPTPVLT
DEG_SCF_FBW7_1
0.7078
p.P2730S
LS-411N
large_intestine
COSMIC
PTPTPVLT
DEG_SCF_FBW7_1
0.0556
p.T2739I
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PTPTPVLT
DEG_SCF_FBW7_1
0.3056
p.T2742I
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PTPTPVLT
DEG_SCF_FBW7_1
0.7078
Drug responses associated with LAMA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPTPVLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P24043
Laminin subunit alpha-2
DEG_SCF_FBW7_1
2740:2747
PTPTPVLT
FBXW7
0.9454
More...