DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPTVS
Uniprot ID:
Q5HYW2
Source protein:
NHS-like protein 2
Source gene:
NHSL2
Class:
DEG_SCF_FBW7_1
Location:
722:727
E3 ligase:
FBXW7
DEGRON score:
0.9927
ASA_SCORE:
76.6667
COIL:
0.9535
CONS_SCORE:
0
DSS_SCORE:
0.6391
HELIX:
0.0222
FCONS_SCORE:
0
RIG_SCORE:
0.6427
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P722A
TCGA-A5-A0GP
UCEC
TCGA
PTPTVS
DEG_SCF_FBW7_1
0.7503
p.T723A
TCGA-B5-A0JY
UCEC
TCGA
PTPTVS
DEG_SCF_FBW7_1
0.7139
p.T723A
DO43041
UCEC
ICGC
PTPTVS
DEG_SCF_FBW7_1
0.7139
p.S729F
TCGA-FI-A2D5
UCEC
TCGA
PTPTVS
DEG_SCF_FBW7_1
0.2778
p.D726N
DO233725
GACA
ICGC
PTPTVS
DEG_SCF_FBW7_1
0.6932
p.T719M
DO49159
PACA
ICGC
PTPTVS
DEG_SCF_FBW7_1
0.25
p.V726F
DO51148
PRAD
ICGC
PTPTVS
DEG_SCF_FBW7_1
0.5957
p.Q733H
DO43306
UCEC
ICGC
PTPTVS
DEG_SCF_FBW7_1
0.1667
p.M730L
TE-5
oesophagus
COSMIC
PTPTVS
DEG_SCF_FBW7_1
0.25
p.Q719H
NCI-H187
lung
COSMIC
PTPTVS
DEG_SCF_FBW7_1
0.25
Drug responses associated with NHSL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPTVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5HYW2
NHS-like protein 2
DEG_SCF_FBW7_1
722:727
PTPTVS
FBXW7
0.9927
More...