DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPVHS
Uniprot ID:
Q9BYB0
Source protein:
SH3 and multiple ankyrin repeat domains protein 3
Source gene:
SHANK3
Class:
DEG_SCF_FBW7_1
Location:
1128:1133
E3 ligase:
FBXW7
DEGRON score:
0.9972
ASA_SCORE:
98.9333
COIL:
0.97
CONS_SCORE:
0.3847
DSS_SCORE:
0.7769
HELIX:
0.0127
FCONS_SCORE:
1.1799
RIG_SCORE:
0.5452
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1139V
TCGA-27-1833
GBM
TCGA
PTPVHS
DEG_SCF_FBW7_1
0.1667
p.A1139V
DO12976
GBM
ICGC
PTPVHS
DEG_SCF_FBW7_1
0.1667
p.A1127S
TCGA-BP-4162
KIRC
TCGA
PTPVHS
DEG_SCF_FBW7_1
0.3056
p.A1127S
DO20545
KIRC
ICGC
PTPVHS
DEG_SCF_FBW7_1
0.3056
p.P1120L
TCGA-ER-A19A
SKCM
TCGA
PTPVHS
DEG_SCF_FBW7_1
0.1111
p.P1120L
DO47425
SKCM
ICGC
PTPVHS
DEG_SCF_FBW7_1
0.1111
p.A1136V
TCGA-G7-A8LB
KIRP
TCGA
PTPVHS
DEG_SCF_FBW7_1
0.25
p.A1136V
DO51553
KIRP
ICGC
PTPVHS
DEG_SCF_FBW7_1
0.25
p.P1140L
DO233221
GACA
ICGC
PTPVHS
DEG_SCF_FBW7_1
0.1389
p.R1125W
SIDM00423
B-Cell Non-Hodgkin's Lymphoma
GDSC
PTPVHS
DEG_SCF_FBW7_1
0.25
p.R1125W
SIDM01113
Other Sarcomas
GDSC
PTPVHS
DEG_SCF_FBW7_1
0.25
p.R1125W
SU-DHL-8
NS
COSMIC
PTPVHS
DEG_SCF_FBW7_1
0.25
p.R1125W
SK-UT-1
soft_tissue
COSMIC
PTPVHS
DEG_SCF_FBW7_1
0.25
p.R1137C
SIDM00783
Colorectal Carcinoma
GDSC
PTPVHS
DEG_SCF_FBW7_1
0.2222
p.R1137C
HCT-116
large_intestine
COSMIC
PTPVHS
DEG_SCF_FBW7_1
0.2222
p.P1137S
ACH-000604
Leukemia
CCLE
PTPVHS
DEG_SCF_FBW7_1
0.2222
p.R1124C
ACH-000971
Colon/Colorectal Cancer
CCLE
PTPVHS
DEG_SCF_FBW7_1
0.2222
p.R1119W
SK-UT-1
soft_tissue
COSMIC
PTPVHS
DEG_SCF_FBW7_1
0.0833
p.R1119W
SU-DHL-8
NS
COSMIC
PTPVHS
DEG_SCF_FBW7_1
0.0833
p.R1131C
HCT-116
large_intestine
COSMIC
PTPVHS
DEG_SCF_FBW7_1
0.8301
Drug responses associated with SHANK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPVHS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BYB0
SH3 and multiple ankyrin repeat domains protein 3
DEG_SCF_FBW7_1
1128:1133
PTPVHS
FBXW7
0.9972
More...