DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPVNS
Uniprot ID:
P80192
Source protein:
Mitogen-activated protein kinase kinase kinase 9
Source gene:
MAP3K9
Class:
DEG_SCF_FBW7_1
Location:
721:726
E3 ligase:
FBXW7
DEGRON score:
0.9399
ASA_SCORE:
81.6667
COIL:
0.9203
CONS_SCORE:
0.3997
DSS_SCORE:
0.7794
HELIX:
0.0415
FCONS_SCORE:
0.9619
RIG_SCORE:
0.6165
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F717L
TCGA-D3-A5GL
SKCM
TCGA
PTPVNS
DEG_SCF_FBW7_1
0.2222
p.L713I
TCGA-EY-A215
UCEC
TCGA
PTPVNS
DEG_SCF_FBW7_1
0.1111
p.G720R
TCGA-FR-A3R1
SKCM
TCGA
PTPVNS
DEG_SCF_FBW7_1
0.3056
p.D724N
TCGA-GD-A3OQ
BLCA
TCGA
PTPVNS
DEG_SCF_FBW7_1
0.6932
p.R719C
TCGA-W3-A824
SKCM
TCGA
PTPVNS
DEG_SCF_FBW7_1
0.2778
p.D722Y
TCGA-WE-AA9Y
SKCM
TCGA
PTPVNS
DEG_SCF_FBW7_1
0.7325
p.H723P
DO48393
BLCA
ICGC
PTPVNS
DEG_SCF_FBW7_1
0.7694
p.R725H
DO22237
LGG
ICGC
PTPVNS
DEG_SCF_FBW7_1
0.8244
p.R718W
DO49657
LIHC
ICGC
PTPVNS
DEG_SCF_FBW7_1
0.25
p.A721V
DO222702
MELA
ICGC
PTPVNS
DEG_SCF_FBW7_1
0.6936
p.K717R
DO220176
SARC
ICGC
PTPVNS
DEG_SCF_FBW7_1
0.2222
p.E727D
DO37571
SKCM
ICGC
PTPVNS
DEG_SCF_FBW7_1
0.3056
p.E727K
DO52399
UCEC
ICGC
PTPVNS
DEG_SCF_FBW7_1
0.3056
p.L730M
DO41644
UCEC
ICGC
PTPVNS
DEG_SCF_FBW7_1
0.2222
p.R719H
SIDM00473
Oral Cavity Carcinoma
GDSC
PTPVNS
DEG_SCF_FBW7_1
0.2778
p.G730R
SIDM01259
B-Lymphoblastic Leukemia
GDSC
PTPVNS
DEG_SCF_FBW7_1
0.2222
p.G730R
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.2222
p.R718S
ACH-000830
Lung Cancer
CCLE
PTPVNS
DEG_SCF_FBW7_1
0.25
p.R718S
NCI-H1436
lung
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.25
p.P727L
NCI-H1355
lung
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.3056
p.R713S
NCI-H1436
lung
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.1111
p.G716R
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.1944
p.R729Q
TE-9
oesophagus
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.25
p.R724H
TMK-1
stomach
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.8244
p.R724H
PC-3_[JPC-3]
lung
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.8244
p.R718Q
Hs633T
soft_tissue
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.25
p.N728H
ASH-3
thyroid
COSMIC
PTPVNS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with MAP3K9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPVNS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P80192
Mitogen-activated protein kinase kinase kinase 9
DEG_SCF_FBW7_1
721:726
PTPVNS
FBXW7
0.9399
More...