DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPYST
Uniprot ID:
Q5R3F8
Source protein:
Protein phosphatase 1 regulatory subunit 29
Source gene:
ELFN2
Class:
DEG_SCF_FBW7_1
Location:
258:263
E3 ligase:
FBXW7
DEGRON score:
0.5078
ASA_SCORE:
77
COIL:
0.8652
CONS_SCORE:
0.4818
DSS_SCORE:
0.7434
HELIX:
0.0442
FCONS_SCORE:
0.8155
RIG_SCORE:
0.6221
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R253Q
TCGA-94-8490
LUSC
TCGA
PTPYST
DEG_SCF_FBW7_1
0.1944
p.R253Q
TCGA-DU-6392
LGG
TCGA
PTPYST
DEG_SCF_FBW7_1
0.1944
p.R253Q
DO22237
LGG
ICGC
PTPYST
DEG_SCF_FBW7_1
0.1944
p.R253Q
DO52021
LUSC
ICGC
PTPYST
DEG_SCF_FBW7_1
0.1944
p.E271D
TCGA-AP-A1E0
UCEC
TCGA
PTPYST
DEG_SCF_FBW7_1
0.1111
p.E271D
DO43154
UCEC
ICGC
PTPYST
DEG_SCF_FBW7_1
0.1111
p.Q266R
TCGA-D9-A6EC
SKCM
TCGA
PTPYST
DEG_SCF_FBW7_1
0.25
p.Q266R
DO50291
SKCM
ICGC
PTPYST
DEG_SCF_FBW7_1
0.25
p.S249L
TCGA-DM-A282
COAD
TCGA
PTPYST
DEG_SCF_FBW7_1
0.0833
p.S249L
DO9058
COAD
ICGC
PTPYST
DEG_SCF_FBW7_1
0.0833
p.N272K
DO222926
BTCA
ICGC
PTPYST
DEG_SCF_FBW7_1
0.0833
p.V255M
DO50775
LICA
ICGC
PTPYST
DEG_SCF_FBW7_1
0.25
p.P258S
DO229462
SKCA
ICGC
PTPYST
DEG_SCF_FBW7_1
0.6752
p.A265T
SIDM00572
Gastric Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.2778
p.V255L
SIDM01040
Ovarian Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00781
Colorectal Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00544
Neuroblastoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00369
Esophageal Squamous Cell Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM01180
Hepatocellular Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00008
Ovarian Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00780
Colorectal Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.S262Y
SIDM00721
Small Cell Lung Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.6009
p.S262Y
SIDM01664
Prostate Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.6009
p.A265V
ACH-001570
Skin Cancer
CCLE
PTPYST
DEG_SCF_FBW7_1
0.2778
Drug responses associated with ELFN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPYST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5R3F8
Protein phosphatase 1 regulatory subunit 29
DEG_SCF_FBW7_1
258:263
PTPYST
FBXW7
0.5078
More...