DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPYST
Uniprot ID:
Q5R3F8
Source protein:
Protein phosphatase 1 regulatory subunit 29
Source gene:
ELFN2
Class:
DEG_SCF_FBW7_1
Location:
258:263
E3 ligase:
FBXW7
DEGRON score:
0.5078
ASA_SCORE:
77
COIL:
0.8652
CONS_SCORE:
0.4818
DSS_SCORE:
0.7434
HELIX:
0.0442
FCONS_SCORE:
0.8155
RIG_SCORE:
0.6221
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P258S
DO229462
SKCA
ICGC
PTPYST
DEG_SCF_FBW7_1
0.6752
p.S262Y
SIDM00721
Small Cell Lung Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.6009
p.S262Y
SIDM01664
Prostate Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.6009
p.A265T
SIDM00572
Gastric Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.2778
p.A265V
ACH-001570
Skin Cancer
CCLE
PTPYST
DEG_SCF_FBW7_1
0.2778
p.Q266R
TCGA-D9-A6EC
SKCM
TCGA
PTPYST
DEG_SCF_FBW7_1
0.25
p.Q266R
DO50291
SKCM
ICGC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255M
DO50775
LICA
ICGC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM01040
Ovarian Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00781
Colorectal Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00544
Neuroblastoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00369
Esophageal Squamous Cell Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM01180
Hepatocellular Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00008
Ovarian Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.V255L
SIDM00780
Colorectal Carcinoma
GDSC
PTPYST
DEG_SCF_FBW7_1
0.25
p.R253Q
TCGA-94-8490
LUSC
TCGA
PTPYST
DEG_SCF_FBW7_1
0.1944
p.R253Q
TCGA-DU-6392
LGG
TCGA
PTPYST
DEG_SCF_FBW7_1
0.1944
p.R253Q
DO22237
LGG
ICGC
PTPYST
DEG_SCF_FBW7_1
0.1944
p.R253Q
DO52021
LUSC
ICGC
PTPYST
DEG_SCF_FBW7_1
0.1944
p.E271D
TCGA-AP-A1E0
UCEC
TCGA
PTPYST
DEG_SCF_FBW7_1
0.1111
p.E271D
DO43154
UCEC
ICGC
PTPYST
DEG_SCF_FBW7_1
0.1111
p.S249L
TCGA-DM-A282
COAD
TCGA
PTPYST
DEG_SCF_FBW7_1
0.0833
p.S249L
DO9058
COAD
ICGC
PTPYST
DEG_SCF_FBW7_1
0.0833
p.N272K
DO222926
BTCA
ICGC
PTPYST
DEG_SCF_FBW7_1
0.0833
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Drug responses associated with ELFN2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PTPYST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5R3F8
Protein phosphatase 1 regulatory subunit 29
DEG_SCF_FBW7_1
258:263
PTPYST
FBXW7
0.5078
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