DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTTPGPT
Uniprot ID:
Q9UBB6
Source protein:
Neurochondrin
Source gene:
NCDN
Class:
DEG_SCF_FBW7_1
Location:
449:455
E3 ligase:
FBXW7
DEGRON score:
0.8553
ASA_SCORE:
82.5429
COIL:
0.9464
CONS_SCORE:
0.3993
DSS_SCORE:
0.4063
HELIX:
0.0237
FCONS_SCORE:
0.7703
RIG_SCORE:
0.6598
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P449L
TCGA-B5-A11G
UCEC
TCGA
PTTPGPT
DEG_SCF_FBW7_1
0.6471
p.P449L
DO43514
UCEC
ICGC
PTTPGPT
DEG_SCF_FBW7_1
0.6471
p.R462W
TCGA-B5-A3FC
UCEC
TCGA
PTTPGPT
DEG_SCF_FBW7_1
0.1389
p.R462W
TCGA-EO-A3AV
UCEC
TCGA
PTTPGPT
DEG_SCF_FBW7_1
0.1389
p.R462W
DO52412
UCEC
ICGC
PTTPGPT
DEG_SCF_FBW7_1
0.1389
p.R462W
DO41871
UCEC
ICGC
PTTPGPT
DEG_SCF_FBW7_1
0.1389
p.A460T
TCGA-D7-A6EZ
STAD
TCGA
PTTPGPT
DEG_SCF_FBW7_1
0.1944
p.A460T
DO50119
STAD
ICGC
PTTPGPT
DEG_SCF_FBW7_1
0.1944
p.Q441H
TCGA-FS-A1ZR
SKCM
TCGA
PTTPGPT
DEG_SCF_FBW7_1
0.1111
p.Q441H
DO37651
SKCM
ICGC
PTTPGPT
DEG_SCF_FBW7_1
0.1111
p.S448P
TCGA-MH-A856
KIRP
TCGA
PTTPGPT
DEG_SCF_FBW7_1
0.75
p.S448P
DO49774
KIRP
ICGC
PTTPGPT
DEG_SCF_FBW7_1
0.75
p.A443V
DO233259
GACA
ICGC
PTTPGPT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with NCDN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTPGPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UBB6
Neurochondrin
DEG_SCF_FBW7_1
449:455
PTTPGPT
FBXW7
0.8553
More...