DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTTPQRE
Uniprot ID:
Q9NP74
Source protein:
Palmdelphin
Source gene:
PALMD
Class:
DEG_SCF_FBW7_2
Location:
269:275
E3 ligase:
FBXW7
DEGRON score:
0.9961
ASA_SCORE:
104.9571
COIL:
0.934
CONS_SCORE:
0.5455
DSS_SCORE:
0.6507
HELIX:
0.028
FCONS_SCORE:
0.9732
RIG_SCORE:
0.7045
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E259Q
TCGA-G2-A3IE
BLCA
TCGA
PTTPQRE
DEG_SCF_FBW7_2
0.0556
p.E259Q
TCGA-Q1-A73O
CESC
TCGA
PTTPQRE
DEG_SCF_FBW7_2
0.0556
p.E259Q
DO767
BLCA
ICGC
PTTPQRE
DEG_SCF_FBW7_2
0.0556
p.E259Q
DO51612
CESC
ICGC
PTTPQRE
DEG_SCF_FBW7_2
0.0556
p.E259K
DO227531
PACA
ICGC
PTTPQRE
DEG_SCF_FBW7_2
0.0556
p.T276M
SIDM01123
Prostate Carcinoma
GDSC
PTTPQRE
DEG_SCF_FBW7_2
0.3056
p.T276M
SIDM00266
Ewing's Sarcoma
GDSC
PTTPQRE
DEG_SCF_FBW7_2
0.3056
p.T276M
SIDM00116
Non-Small Cell Lung Carcinoma
GDSC
PTTPQRE
DEG_SCF_FBW7_2
0.3056
p.K259E
GP5d
large_intestine
COSMIC
PTTPQRE
DEG_SCF_FBW7_2
0.0556
p.E272K
IGR-1
skin
COSMIC
PTTPQRE
DEG_SCF_FBW7_2
0.7022
Drug responses associated with PALMD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTPQRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NP74
Palmdelphin
DEG_SCF_FBW7_2
269:275
PTTPQRE
FBXW7
0.9961
More...