DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVATPTSS
Uniprot ID:
O00592
Source protein:
Podocalyxin
Source gene:
PODXL
Class:
DEG_SCF_FBW7_1
Location:
197:204
E3 ligase:
FBXW7
DEGRON score:
0.9797
ASA_SCORE:
88.025
COIL:
0.9539
CONS_SCORE:
0.3419
DSS_SCORE:
0.7234
HELIX:
0.0188
FCONS_SCORE:
0.9731
RIG_SCORE:
0.5849
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R190Q
TCGA-5C-A9VH
LIHC
TCGA
PVATPTSS
DEG_SCF_FBW7_1
0.1389
p.R190Q
TCGA-BR-8487
STAD
TCGA
PVATPTSS
DEG_SCF_FBW7_1
0.1389
p.H208Y
TCGA-68-8250
LUSC
TCGA
PVATPTSS
DEG_SCF_FBW7_1
0.2222
p.H208Y
DO219219
LUSC
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.2222
p.T195M
TCGA-73-4668
LUAD
TCGA
PVATPTSS
DEG_SCF_FBW7_1
0.7222
p.T195M
TCGA-CR-7397
HNSC
TCGA
PVATPTSS
DEG_SCF_FBW7_1
0.7222
p.P189S
TCGA-BF-A5EP
SKCM
TCGA
PVATPTSS
DEG_SCF_FBW7_1
0.1111
p.S213L
TCGA-EE-A2MF
SKCM
TCGA
PVATPTSS
DEG_SCF_FBW7_1
0.0833
p.P192L
TCGA-LN-A4A9
ESCA
TCGA
PVATPTSS
DEG_SCF_FBW7_1
0.1944
p.H206Y
TCGA-O2-A52Q
LUSC
TCGA
PVATPTSS
DEG_SCF_FBW7_1
0.2778
p.Q193K
DO224942
BRCA
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.6667
p.Q193K
DO229041
LICA
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.6667
p.P188L
DO222952
BTCA
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.5278
p.S196L
DO229010
COCA
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.3056
p.S196L
DO229016
COCA
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.3056
p.S196L
DO229003
COCA
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.3056
p.S196L
DO229005
COCA
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.3056
p.S196L
DO52365
LUSC
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.3056
p.T197M
DO228123
EOPC
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.7423
p.T197M
DO50365
ESAD
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.7423
p.T197M
DO15583
HNSC
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.7423
p.T197M
DO23961
LUAD
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.7423
p.L211F
DO11854
GBM
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.25
p.H198N
DO229032
LICA
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.7423
p.S190R
DO229045
LICA
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.1389
p.R192Q
DO52166
LIHC
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.1944
p.R192Q
DO47867
STAD
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.1944
p.P188T
DO26993
LUSC
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.5278
p.H210Y
DO26993
LUSC
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.1667
p.P191S
DO223906
SKCM
ICGC
PVATPTSS
DEG_SCF_FBW7_1
0.1667
p.I212M
ACH-001991
Primary
CCLE
PVATPTSS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with PODXL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVATPTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SCF_FBW7_1
197:204
PVATPTSS
FBXW7
0.9797
More...