DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVDTPAST
Uniprot ID:
P46013
Source protein:
Proliferation marker protein Ki-67
Source gene:
MKI67
Class:
DEG_SCF_FBW7_1
Location:
2349:2356
E3 ligase:
FBXW7
DEGRON score:
0.9968
ASA_SCORE:
88.5875
COIL:
0.9323
CONS_SCORE:
0.3989
DSS_SCORE:
0.7808
HELIX:
0.0211
FCONS_SCORE:
1.1277
RIG_SCORE:
0.6401
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T2356N
DO230525
LUSC
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.8166
p.K2343T
TCGA-EO-A3AV
UCEC
TCGA
PVDTPAST
DEG_SCF_FBW7_1
0.6111
p.K2343T
DO41211
UCEC
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.6111
p.K2357N
TCGA-EO-A22R
UCEC
TCGA
PVDTPAST
DEG_SCF_FBW7_1
0.3056
p.E2347K
DO9876
COAD
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2778
p.E2347K
DO52402
UCEC
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2778
p.A2358T
DO46657
PAAD
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2778
p.R2359W
TCGA-DF-A2KU
UCEC
TCGA
PVDTPAST
DEG_SCF_FBW7_1
0.25
p.P2360L
TCGA-AP-A051
UCEC
TCGA
PVDTPAST
DEG_SCF_FBW7_1
0.2222
p.T2360P
DO228483
BRCA
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2222
p.T2360P
DO229010
COCA
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2222
p.T2360P
DO229013
COCA
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2222
p.T2360P
DO229016
COCA
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2222
p.T2360P
DO229480
LAML
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2222
p.T2360P
DO228941
LICA
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2222
p.T2360K
DO229015
LICA
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.2222
p.R2362K
TCGA-XF-AAMG
BLCA
TCGA
PVDTPAST
DEG_SCF_FBW7_1
0.1667
p.G2339S
SCaBER
urinary_tract
COSMIC
PVDTPAST
DEG_SCF_FBW7_1
0.1667
p.H2363N
DO229035
LICA
ICGC
PVDTPAST
DEG_SCF_FBW7_1
0.1389
p.I2340L
TCGA-AG-A002
READ
TCGA
PVDTPAST
DEG_SCF_FBW7_1
0.0833
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Drug responses associated with MKI67 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PVDTPAST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46013
Proliferation marker protein Ki-67
DEG_SCF_FBW7_1
2349:2356
PVDTPAST
FBXW7
0.9968
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