DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVDTPTST
Uniprot ID:
P46013
Source protein:
Proliferation marker protein Ki-67
Source gene:
MKI67
Class:
DEG_SCF_FBW7_1
Location:
1258:1265
E3 ligase:
FBXW7
DEGRON score:
0.9913
ASA_SCORE:
90.0375
COIL:
0.9229
CONS_SCORE:
0.47
DSS_SCORE:
0.7685
HELIX:
0.0221
FCONS_SCORE:
1.2685
RIG_SCORE:
0.6509
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1271K
TCGA-05-4424
LUAD
TCGA
PVDTPTST
DEG_SCF_FBW7_1
0.1667
p.R1268Q
TCGA-AA-3984
COAD
TCGA
PVDTPTST
DEG_SCF_FBW7_1
0.25
p.R1268Q
SIDM00313
Hodgkin's Lymphoma
GDSC
PVDTPTST
DEG_SCF_FBW7_1
0.25
p.R1268Q
ACH-000702
Lymphoma
CCLE
PVDTPTST
DEG_SCF_FBW7_1
0.25
p.R1268Q
L-1236
haematopoietic_and_lymphoid_tissue
COSMIC
PVDTPTST
DEG_SCF_FBW7_1
0.25
p.S1256P
TCGA-AX-A063
UCEC
TCGA
PVDTPTST
DEG_SCF_FBW7_1
0.7222
p.P1250L
TCGA-CM-5861
COAD
TCGA
PVDTPTST
DEG_SCF_FBW7_1
0.1111
p.P1250S
TCGA-D1-A16X
UCEC
TCGA
PVDTPTST
DEG_SCF_FBW7_1
0.1111
p.S1264I
TCGA-ZJ-AAX8
CESC
TCGA
PVDTPTST
DEG_SCF_FBW7_1
0.7341
p.A1254T
DO5521
BRCA
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.2222
p.N1265K
DO233885
GACA
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.6918
p.N1265K
DO229041
LICA
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.6918
p.K1274N
DO14550
HNSC
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.0833
p.D1248N
DO218995
HNSC
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.5
p.D1263E
DO229019
LICA
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.6758
p.D1263E
DO229037
LICA
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.6758
p.P1260T
DO229038
LICA
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.7031
p.D1263G
DO36389
READ
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.7198
p.K1264R
DO42312
UCEC
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.7237
p.T1275A
DO41903
UCEC
ICGC
PVDTPTST
DEG_SCF_FBW7_1
0.5
p.K1248I
SIDM00689
B-Lymphoblastic Leukemia
GDSC
PVDTPTST
DEG_SCF_FBW7_1
0.5
p.K1248I
ACH-000151
Leukemia
CCLE
PVDTPTST
DEG_SCF_FBW7_1
0.5
p.K1248I
JM1
haematopoietic_and_lymphoid_tissue
COSMIC
PVDTPTST
DEG_SCF_FBW7_1
0.5
p.I1273M
SIDM00631
Breast Carcinoma
GDSC
PVDTPTST
DEG_SCF_FBW7_1
0.1111
p.I1273M
ACH-001358
Breast Cancer
CCLE
PVDTPTST
DEG_SCF_FBW7_1
0.1111
p.I1273M
MDA-MB-330
breast
COSMIC
PVDTPTST
DEG_SCF_FBW7_1
0.1111
p.D1252N
SIDM00487
Colorectal Carcinoma
GDSC
PVDTPTST
DEG_SCF_FBW7_1
0.1667
p.D1252N
ACH-000963
Colon/Colorectal Cancer
CCLE
PVDTPTST
DEG_SCF_FBW7_1
0.1667
p.D1252N
CCK-81
large_intestine
COSMIC
PVDTPTST
DEG_SCF_FBW7_1
0.1667
p.K1256R
H290
pleura
COSMIC
PVDTPTST
DEG_SCF_FBW7_1
0.7222
p.Q1259P
CAL-12T
lung
COSMIC
PVDTPTST
DEG_SCF_FBW7_1
0.7035
p.R1272W
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PVDTPTST
DEG_SCF_FBW7_1
0.5833
Drug responses associated with MKI67 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVDTPTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46013
Proliferation marker protein Ki-67
DEG_SCF_FBW7_1
1258:1265
PVDTPTST
FBXW7
0.9913
More...