DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVDTTPAK
Uniprot ID:
A8MYV0
Source protein:
Doublecortin domain-containing protein 2C
Source gene:
DCDC2C
Class:
DEG_SCF_SKP2-CKS1_1
Location:
9:16
E3 ligase:
SKP2,CSK1
DEGRON score:
0.8847
ASA_SCORE:
81.425
COIL:
0.8994
CONS_SCORE:
0.7517
DSS_SCORE:
0.4407
HELIX:
0.012
FCONS_SCORE:
0.9808
RIG_SCORE:
0.7405
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A3V
DO227674
COCA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.6111
p.F6L
DO228555
LICA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.25
p.F6L
DO228986
LICA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.25
p.G20V
DO229018
LICA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.2222
p.A4S
DO229028
LICA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.1944
p.L15I
DO220899
MELA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.7174
p.P26L
SIDM01272
Colorectal Carcinoma
GDSC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.0556
p.R22H
SIDM01086
B-Lymphoblastic Leukemia
GDSC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.1667
p.E5D
ACH-000680
Colon/Colorectal Cancer
CCLE
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.2222
Drug responses associated with DCDC2C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVDTTPAK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MYV0
Doublecortin domain-containing protein 2C
DEG_SCF_SKP2-CKS1_1
9:16
PVDTTPAK
SKP2,CSK1
0.8847
More...