DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVDTTPAK
Uniprot ID:
A8MYV0
Source protein:
Doublecortin domain-containing protein 2C
Source gene:
DCDC2C
Class:
DEG_SCF_SKP2-CKS1_1
Location:
9:16
E3 ligase:
SKP2,CSK1
DEGRON score:
0.8847
ASA_SCORE:
81.425
COIL:
0.8994
CONS_SCORE:
0.7517
DSS_SCORE:
0.4407
HELIX:
0.012
FCONS_SCORE:
0.9808
RIG_SCORE:
0.7405
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L15I
DO220899
MELA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.7174
p.A3V
DO227674
COCA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.6111
p.F6L
DO228555
LICA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.25
p.F6L
DO228986
LICA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.25
p.G20V
DO229018
LICA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.2222
p.E5D
ACH-000680
Colon/Colorectal Cancer
CCLE
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.2222
p.A4S
DO229028
LICA
ICGC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.1944
p.R22H
SIDM01086
B-Lymphoblastic Leukemia
GDSC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.1667
p.P26L
SIDM01272
Colorectal Carcinoma
GDSC
PVDTTPAK
DEG_SCF_SKP2-CKS1_1
0.0556
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Drug responses associated with DCDC2C mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PVDTTPAK
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MYV0
Doublecortin domain-containing protein 2C
DEG_SCF_SKP2-CKS1_1
9:16
PVDTTPAK
SKP2,CSK1
0.8847
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