DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVGTPFEE
Uniprot ID:
O75056
Source protein:
Syndecan-3
Source gene:
SDC3
Class:
DEG_SCF_FBW7_2
Location:
121:128
E3 ligase:
FBXW7
DEGRON score:
0.9197
ASA_SCORE:
90.1625
COIL:
0.9203
CONS_SCORE:
0.4742
DSS_SCORE:
0.6065
HELIX:
0.0225
FCONS_SCORE:
1.0347
RIG_SCORE:
0.7188
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S131C
TCGA-55-A48Y
LUAD
TCGA
PVGTPFEE
DEG_SCF_FBW7_2
0.25
p.R133H
TCGA-A5-A0GA
UCEC
TCGA
PVGTPFEE
DEG_SCF_FBW7_2
0.1944
p.G123C
TCGA-EE-A29X
SKCM
TCGA
PVGTPFEE
DEG_SCF_FBW7_2
0.6489
p.T129I
DO51926
BLCA
ICGC
PVGTPFEE
DEG_SCF_FBW7_2
0.3056
p.T120I
DO229005
COCA
ICGC
PVGTPFEE
DEG_SCF_FBW7_2
0.3056
p.A123V
DO233634
GACA
ICGC
PVGTPFEE
DEG_SCF_FBW7_2
0.6936
p.T135I
DO220885
MELA
ICGC
PVGTPFEE
DEG_SCF_FBW7_2
0.1389
p.P137L
DO220906
MELA
ICGC
PVGTPFEE
DEG_SCF_FBW7_2
0.0833
p.A128T
DO39288
THCA
ICGC
PVGTPFEE
DEG_SCF_FBW7_2
0.7139
p.T117M
SIDM00683
Prostate Carcinoma
GDSC
PVGTPFEE
DEG_SCF_FBW7_2
0.2222
p.S131T
SIDM00789
Colorectal Carcinoma
GDSC
PVGTPFEE
DEG_SCF_FBW7_2
0.25
p.S131T
ACH-000997
Colon/Colorectal Cancer
CCLE
PVGTPFEE
DEG_SCF_FBW7_2
0.25
p.S131T
ACH-001061
Colon/Colorectal Cancer
CCLE
PVGTPFEE
DEG_SCF_FBW7_2
0.25
p.R133C
SIDM00217
Colorectal Carcinoma
GDSC
PVGTPFEE
DEG_SCF_FBW7_2
0.1944
p.R133C
ACH-000999
Colon/Colorectal Cancer
CCLE
PVGTPFEE
DEG_SCF_FBW7_2
0.1944
p.R133C
SNU-1040
large_intestine
COSMIC
PVGTPFEE
DEG_SCF_FBW7_2
0.1944
p.G123D
SIDM01679
Small Cell Lung Carcinoma
GDSC
PVGTPFEE
DEG_SCF_FBW7_2
0.6087
p.G123D
ACH-000523
Lung Cancer
CCLE
PVGTPFEE
DEG_SCF_FBW7_2
0.6087
Drug responses associated with SDC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVGTPFEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75056
Syndecan-3
DEG_SCF_FBW7_2
121:128
PVGTPFEE
FBXW7
0.9197
More...