DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVTTPTDE
Uniprot ID:
Q3KR37
Source protein:
Protein Aster-B
Source gene:
GRAMD1B
Class:
DEG_SCF_FBW7_2
Location:
582:589
E3 ligase:
FBXW7
DEGRON score:
0.6425
ASA_SCORE:
89.7125
COIL:
0.876
CONS_SCORE:
0.2551
DSS_SCORE:
0.6182
HELIX:
0.0781
FCONS_SCORE:
1.03
RIG_SCORE:
0.662
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R572Q
TCGA-A5-A0G2
UCEC
TCGA
PVTTPTDE
DEG_SCF_FBW7_2
0.0556
p.R572Q
WSU-NHL
haematopoietic_and_lymphoid_tissue
COSMIC
PVTTPTDE
DEG_SCF_FBW7_2
0.0556
p.D588G
TCGA-B5-A11E
UCEC
TCGA
PVTTPTDE
DEG_SCF_FBW7_2
0.6087
p.T585M
TCGA-BR-8078
STAD
TCGA
PVTTPTDE
DEG_SCF_FBW7_2
0.8534
p.S581N
TCGA-BR-8487
STAD
TCGA
PVTTPTDE
DEG_SCF_FBW7_2
0.75
p.H575N
TCGA-CR-7385
HNSC
TCGA
PVTTPTDE
DEG_SCF_FBW7_2
0.1389
p.R594M
TCGA-DF-A2KN
UCEC
TCGA
PVTTPTDE
DEG_SCF_FBW7_2
0.1944
p.R573C
DO222492
COCA
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.0833
p.R573C
DO41199
UCEC
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.0833
p.H582N
DO14282
HNSC
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.7423
p.D597Y
DO229036
LICA
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.1111
p.A576G
DO218944
LUAD
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.1667
p.G599C
DO50672
ORCA
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.0556
p.R573H
DO36531
READ
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.0833
p.S588N
DO47867
STAD
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.7069
p.T592M
DO38288
STAD
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.25
p.T592M
SIDM02049
Pancreatic Carcinoma
GDSC
PVTTPTDE
DEG_SCF_FBW7_2
0.25
p.D595G
DO41644
UCEC
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.1667
p.R579Q
DO41235
UCEC
ICGC
PVTTPTDE
DEG_SCF_FBW7_2
0.25
p.R579Q
SIDM00412
B-Cell Non-Hodgkin's Lymphoma
GDSC
PVTTPTDE
DEG_SCF_FBW7_2
0.25
p.R579Q
WSU-NHL
haematopoietic_and_lymphoid_tissue
COSMIC
PVTTPTDE
DEG_SCF_FBW7_2
0.25
p.G599S
SIDM01146
Gastric Carcinoma
GDSC
PVTTPTDE
DEG_SCF_FBW7_2
0.0556
p.G599S
NCI-SNU-1
stomach
COSMIC
PVTTPTDE
DEG_SCF_FBW7_2
0.0556
p.V598E
SIDM00192
Colorectal Carcinoma
GDSC
PVTTPTDE
DEG_SCF_FBW7_2
0.0833
p.D590E
ACH-000512
Myeloma
CCLE
PVTTPTDE
DEG_SCF_FBW7_2
0.3056
p.G592S
ACH-000932
Gastric Cancer
CCLE
PVTTPTDE
DEG_SCF_FBW7_2
0.25
p.G592S
NCI-SNU-1
stomach
COSMIC
PVTTPTDE
DEG_SCF_FBW7_2
0.25
p.G574R
JHOS-4
ovary
COSMIC
PVTTPTDE
DEG_SCF_FBW7_2
0.1111
p.G578R
JHOS-4
ovary
COSMIC
PVTTPTDE
DEG_SCF_FBW7_2
0.2222
p.T589A
KYSE-510
oesophagus
COSMIC
PVTTPTDE
DEG_SCF_FBW7_2
0.7139
p.Y573C
C2BBe1
large_intestine
COSMIC
PVTTPTDE
DEG_SCF_FBW7_2
0.0833
Drug responses associated with GRAMD1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTTPTDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q3KR37
Protein Aster-B
DEG_SCF_FBW7_2
582:589
PVTTPTDE
FBXW7
0.6425
More...