DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PWKTPSVS
Uniprot ID:
P78363
Source protein:
Retinal-specific phospholipid-transporting ATPase ABCA4
Source gene:
ABCA4
Class:
DEG_SCF_FBW7_1
Location:
1460:1467
E3 ligase:
FBXW7
DEGRON score:
0.5192
ASA_SCORE:
69.6
COIL:
0.924
CONS_SCORE:
0.1931
DSS_SCORE:
0.4735
HELIX:
0.033
FCONS_SCORE:
1.0245
RIG_SCORE:
0.7395
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1456C
TCGA-09-2044
OV
TCGA
PWKTPSVS
DEG_SCF_FBW7_1
0.2222
p.G1456C
DO28923
OV
ICGC
PWKTPSVS
DEG_SCF_FBW7_1
0.2222
p.P1451S
TCGA-AP-A056
UCEC
TCGA
PWKTPSVS
DEG_SCF_FBW7_1
0.0833
p.P1451S
DO43971
UCEC
ICGC
PWKTPSVS
DEG_SCF_FBW7_1
0.0833
p.Q1475H
TCGA-D3-A1Q1
SKCM
TCGA
PWKTPSVS
DEG_SCF_FBW7_1
0.1111
p.Q1475H
DO37445
SKCM
ICGC
PWKTPSVS
DEG_SCF_FBW7_1
0.1111
p.Y1453N
TCGA-DD-A3A9
LIHC
TCGA
PWKTPSVS
DEG_SCF_FBW7_1
0.1389
p.Y1453N
DO44888
LIHC
ICGC
PWKTPSVS
DEG_SCF_FBW7_1
0.1389
p.P1464H
TCGA-DF-A2KN
UCEC
TCGA
PWKTPSVS
DEG_SCF_FBW7_1
0.7694
p.P1464H
DO223282
UCEC
ICGC
PWKTPSVS
DEG_SCF_FBW7_1
0.7694
p.N1469D
TCGA-EO-A22U
UCEC
TCGA
PWKTPSVS
DEG_SCF_FBW7_1
0.2778
p.N1469D
DO43755
UCEC
ICGC
PWKTPSVS
DEG_SCF_FBW7_1
0.2778
p.W1461L
TCGA-HE-7129
KIRP
TCGA
PWKTPSVS
DEG_SCF_FBW7_1
0.5904
p.W1461L
DO20786
KIRP
ICGC
PWKTPSVS
DEG_SCF_FBW7_1
0.5904
p.P1468S
DO23511
LIRI
ICGC
PWKTPSVS
DEG_SCF_FBW7_1
0.3056
p.P1451L
DO52680
MALY
ICGC
PWKTPSVS
DEG_SCF_FBW7_1
0.0833
p.P1454S
SIDM01251
T-Cell Non-Hodgkin's Lymphoma
GDSC
PWKTPSVS
DEG_SCF_FBW7_1
0.1667
p.P1454S
ACH-000509
Lymphoma
CCLE
PWKTPSVS
DEG_SCF_FBW7_1
0.1667
p.P1454S
ACH-002240
Lymphoma
CCLE
PWKTPSVS
DEG_SCF_FBW7_1
0.1667
p.P1454S
H9
haematopoietic_and_lymphoid_tissue
COSMIC
PWKTPSVS
DEG_SCF_FBW7_1
0.1667
p.N1469S
SIDM00009
Acute Myeloid Leukemia
GDSC
PWKTPSVS
DEG_SCF_FBW7_1
0.2778
p.N1469S
ACH-002390
Leukemia
CCLE
PWKTPSVS
DEG_SCF_FBW7_1
0.2778
p.N1469S
MC-1010
haematopoietic_and_lymphoid_tissue
COSMIC
PWKTPSVS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with ABCA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PWKTPSVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78363
Retinal-specific phospholipid-transporting ATPase ABCA4
DEG_SCF_FBW7_1
1460:1467
PWKTPSVS
FBXW7
0.5192
More...