DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
QAEGTPAK
Uniprot ID:
A2A3L6
Source protein:
Tetratricopeptide repeat protein 24
Source gene:
TTC24
Class:
DEG_SCF_SKP2-CKS1_1
Location:
432:439
E3 ligase:
SKP2,CSK1
DEGRON score:
0.7369
ASA_SCORE:
70.3375
COIL:
0.5631
CONS_SCORE:
0.3672
DSS_SCORE:
0.7085
HELIX:
0.4068
FCONS_SCORE:
1.0249
RIG_SCORE:
0.6036
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V447I
TCGA-32-4719
GBM
TCGA
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.1111
p.V447I
DO11406
GBM
ICGC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.1111
p.G435E
TCGA-66-2767
LUSC
TCGA
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.6087
p.G435E
DO26713
LUSC
ICGC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.6087
p.E434D
TCGA-67-3771
LUAD
TCGA
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.5647
p.E434D
DO25797
LUAD
ICGC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.5647
p.A440T
TCGA-W3-AA1Q
SKCM
TCGA
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.3056
p.A440T
DO219487
SKCM
ICGC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.3056
p.G446V
DO229032
LICA
ICGC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.1389
p.G428C
DO229038
LICA
ICGC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.2222
p.E434K
DO229459
SKCA
ICGC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.7022
p.P437L
SIDM00117
Non-Small Cell Lung Carcinoma
GDSC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.7582
p.P437L
ACH-000837
Lung Cancer
CCLE
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.7582
p.P437L
NCI-H322M
lung
COSMIC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.7582
p.E434Q
SIDM00971
Breast Carcinoma
GDSC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.6744
p.E434Q
ACH-000828
Breast Cancer
CCLE
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.6744
p.E434Q
ZR-75-30
breast
COSMIC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.6744
p.G422R
SIDM01131
Small Cell Lung Carcinoma
GDSC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.0556
p.G422R
ACH-000355
Lung Cancer
CCLE
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.0556
p.G422R
NCI-H82
lung
COSMIC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.0556
p.G435V
SIDM01470
Acute Myeloid Leukemia
GDSC
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.6421
p.G422E
ACH-001518
Endometrial/Uterine Cancer
CCLE
QAEGTPAK
DEG_SCF_SKP2-CKS1_1
0.0556
Drug responses associated with TTC24 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QAEGTPAK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A2A3L6
Tetratricopeptide repeat protein 24
DEG_SCF_SKP2-CKS1_1
432:439
QAEGTPAK
SKP2,CSK1
0.7369
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