DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
QREVLRNLS
Uniprot ID:
Q15011
Source protein:
Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
Source gene:
HERPUD1
Class:
DEG_APCC_DBOX_1
Location:
127:135
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9624
ASA_SCORE:
75.1333
COIL:
0.7091
CONS_SCORE:
0.3512
DSS_SCORE:
0.561
HELIX:
0.2046
FCONS_SCORE:
0.923
RIG_SCORE:
0.7186
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S136Y
TCGA-12-0778
GBM
TCGA
QREVLRNLS
DEG_APCC_DBOX_1
0.3056
p.E118D
TCGA-B9-4117
KIRP
TCGA
QREVLRNLS
DEG_APCC_DBOX_1
0.0833
p.R132W
TCGA-EI-6917
READ
TCGA
QREVLRNLS
DEG_APCC_DBOX_1
0.7523
p.S120F
TCGA-W3-AA1O
SKCM
TCGA
QREVLRNLS
DEG_APCC_DBOX_1
0.1389
p.E121Q
DO48399
BLCA
ICGC
QREVLRNLS
DEG_APCC_DBOX_1
0.1667
p.Y140C
DO219030
BLCA
ICGC
QREVLRNLS
DEG_APCC_DBOX_1
0.1944
p.G141W
DO228900
LICA
ICGC
QREVLRNLS
DEG_APCC_DBOX_1
0.1667
p.P132L
DO220891
MELA
ICGC
QREVLRNLS
DEG_APCC_DBOX_1
0.7582
p.G136S
DO218960
PAAD
ICGC
QREVLRNLS
DEG_APCC_DBOX_1
0.3056
p.P137L
SIDM01617
Endometrial Carcinoma
GDSC
QREVLRNLS
DEG_APCC_DBOX_1
0.2778
p.P137L
ACH-000994
Endometrial/Uterine Cancer
CCLE
QREVLRNLS
DEG_APCC_DBOX_1
0.2778
p.H145R
IGROV-1
ovary
COSMIC
QREVLRNLS
DEG_APCC_DBOX_1
0.0556
p.S135Y
ESO51
oesophagus
COSMIC
QREVLRNLS
DEG_APCC_DBOX_1
0.712
Drug responses associated with HERPUD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QREVLRNLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15011
Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
DEG_APCC_DBOX_1
127:135
QREVLRNLS
APC,CDC20,FZR1
0.9624
More...