DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
QRGVLQKLI
Uniprot ID:
Q9NZQ3
Source protein:
NCK-interacting protein with SH3 domain
Source gene:
NCKIPSD
Class:
DEG_APCC_DBOX_1
Location:
89:97
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6694
ASA_SCORE:
56.6556
COIL:
0.102
CONS_SCORE:
0.4893
DSS_SCORE:
0.4496
HELIX:
0.8949
FCONS_SCORE:
1.2568
RIG_SCORE:
0.7773
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R100Q
TCGA-KK-A59V
PRAD
TCGA
QRGVLQKLI
DEG_APCC_DBOX_1
0.25
p.R100Q
DO51346
PRAD
ICGC
QRGVLQKLI
DEG_APCC_DBOX_1
0.25
p.E88Q
DO225258
BRCA
ICGC
QRGVLQKLI
DEG_APCC_DBOX_1
0.3056
p.S86R
DO229022
LICA
ICGC
QRGVLQKLI
DEG_APCC_DBOX_1
0.25
p.R106C
SIDM01013
B-Cell Non-Hodgkin's Lymphoma
GDSC
QRGVLQKLI
DEG_APCC_DBOX_1
0.0833
p.R80W
ACH-000132
Ovarian Cancer
CCLE
QRGVLQKLI
DEG_APCC_DBOX_1
0.0833
p.R80W
ACH-000476
Liver Cancer
CCLE
QRGVLQKLI
DEG_APCC_DBOX_1
0.0833
p.R80W
ACH-000843
Lung Cancer
CCLE
QRGVLQKLI
DEG_APCC_DBOX_1
0.0833
p.R80W
ACH-001109
Rhabdoid
CCLE
QRGVLQKLI
DEG_APCC_DBOX_1
0.0833
Drug responses associated with NCKIPSD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QRGVLQKLI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZQ3
NCK-interacting protein with SH3 domain
DEG_APCC_DBOX_1
89:97
QRGVLQKLI
APC,CDC20,FZR1
0.6694
More...