DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
QRPKLKRVM
Uniprot ID:
Q8IWP9
Source protein:
Coiled-coil domain-containing protein 28A
Source gene:
CCDC28A
Class:
DEG_APCC_DBOX_1
Location:
137:145
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9217
ASA_SCORE:
104.3556
COIL:
0.5151
CONS_SCORE:
0.4192
DSS_SCORE:
0.7539
HELIX:
0.4742
FCONS_SCORE:
0.985
RIG_SCORE:
0.6916
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q152H
TCGA-05-4398
LUAD
TCGA
QRPKLKRVM
DEG_APCC_DBOX_1
0.1389
p.Q152H
DO25847
LUAD
ICGC
QRPKLKRVM
DEG_APCC_DBOX_1
0.1389
p.R138Q
TCGA-F5-6814
READ
TCGA
QRPKLKRVM
DEG_APCC_DBOX_1
0.7329
p.R138Q
DO233748
GACA
ICGC
QRPKLKRVM
DEG_APCC_DBOX_1
0.7329
p.R138Q
DO36556
READ
ICGC
QRPKLKRVM
DEG_APCC_DBOX_1
0.7329
p.M145K
TCGA-ZF-AA4V
BLCA
TCGA
QRPKLKRVM
DEG_APCC_DBOX_1
0.6951
p.M145K
DO219087
BLCA
ICGC
QRPKLKRVM
DEG_APCC_DBOX_1
0.6951
p.S134A
DO233086
GACA
ICGC
QRPKLKRVM
DEG_APCC_DBOX_1
0.25
p.A131V
DO228948
LICA
ICGC
QRPKLKRVM
DEG_APCC_DBOX_1
0.1667
Drug responses associated with CCDC28A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QRPKLKRVM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IWP9
Coiled-coil domain-containing protein 28A
DEG_APCC_DBOX_1
137:145
QRPKLKRVM
APC,CDC20,FZR1
0.9217
More...