DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
QRRVTDFFARRRP
Uniprot ID:
Q9H211
Source protein:
DNA replication factor Cdt1
Source gene:
CDT1
Class:
DEG_CRL4_CDT2_1
Location:
3:15
E3 ligase:
DTL
DEGRON score:
0.995
ASA_SCORE:
100.3692
COIL:
0.5678
CONS_SCORE:
0.4835
DSS_SCORE:
0.7453
HELIX:
0.3863
FCONS_SCORE:
1.4378
RIG_SCORE:
0.7474
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I20M
TCGA-GC-A3YS
BLCA
TCGA
QRRVTDFFARRRP
DEG_CRL4_CDT2_1
0.1944
p.I20M
TCGA-GC-A3YS
BLCA
TCGA
QRRVTDFFARRRP
DEG_CRL4_CDT2_2
0.1944
p.I20M
DO850
BLCA
ICGC
QRRVTDFFARRRP
DEG_CRL4_CDT2_1
0.1944
p.I20M
DO850
BLCA
ICGC
QRRVTDFFARRRP
DEG_CRL4_CDT2_2
0.1944
p.I20M
DO224990
BRCA
ICGC
QRRVTDFFARRRP
DEG_CRL4_CDT2_1
0.1944
p.I20M
DO224990
BRCA
ICGC
QRRVTDFFARRRP
DEG_CRL4_CDT2_2
0.1944
p.I20M
DO224594
LUSC
ICGC
QRRVTDFFARRRP
DEG_CRL4_CDT2_1
0.1944
p.I20M
DO224594
LUSC
ICGC
QRRVTDFFARRRP
DEG_CRL4_CDT2_2
0.1944
p.I20M
SIDM00905
Cervical Carcinoma
GDSC
QRRVTDFFARRRP
DEG_CRL4_CDT2_1
0.1944
p.I20M
SIDM00905
Cervical Carcinoma
GDSC
QRRVTDFFARRRP
DEG_CRL4_CDT2_2
0.1944
p.I20M
ACH-001334
Cervical Cancer
CCLE
QRRVTDFFARRRP
DEG_CRL4_CDT2_1
0.1944
p.I20M
ACH-001334
Cervical Cancer
CCLE
QRRVTDFFARRRP
DEG_CRL4_CDT2_2
0.1944
p.I20M
ACH-001335
Cervical Cancer
CCLE
QRRVTDFFARRRP
DEG_CRL4_CDT2_1
0.1944
p.I20M
ACH-001335
Cervical Cancer
CCLE
QRRVTDFFARRRP
DEG_CRL4_CDT2_2
0.1944
p.A21V
DO229221
THCA
ICGC
QRRVTDFFARRRP
DEG_CRL4_CDT2_1
0.1667
p.A21V
DO229221
THCA
ICGC
QRRVTDFFARRRP
DEG_CRL4_CDT2_2
0.1667
Drug responses associated with CDT1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QRRVTDFFARRRP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H211
DNA replication factor Cdt1
DEG_CRL4_CDT2_1
3:15
QRRVTDFFARRRP
DTL
0.995
More...
Q9H211
DNA replication factor Cdt1
DEG_CRL4_CDT2_1
3:15
QRRVTDFFARRRP
DTL
0.995
More...
Q9H211
DNA replication factor Cdt1
DEG_CRL4_CDT2_2
3:15
QRRVTDFFARRRP
DTL
0.995
More...