DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
QRTVLCHMA
Uniprot ID:
Q9H2X0
Source protein:
Chordin
Source gene:
CHRD
Class:
DEG_APCC_DBOX_1
Location:
464:472
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6264
ASA_SCORE:
44.2667
COIL:
0.3229
CONS_SCORE:
0.3804
DSS_SCORE:
0.4375
HELIX:
0.0317
FCONS_SCORE:
0.8593
RIG_SCORE:
0.8279
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R465C
TCGA-68-7757
LUSC
TCGA
QRTVLCHMA
DEG_APCC_DBOX_1
0.8301
p.H479Y
TCGA-DD-AACU
LIHC
TCGA
QRTVLCHMA
DEG_APCC_DBOX_1
0.1389
p.A481T
TCGA-FI-A2D5
UCEC
TCGA
QRTVLCHMA
DEG_APCC_DBOX_1
0.0833
p.P480S
DO44037
BLCA
ICGC
QRTVLCHMA
DEG_APCC_DBOX_1
0.1111
p.R479Q
DO50008
HNSC
ICGC
QRTVLCHMA
DEG_APCC_DBOX_1
0.1389
p.S468N
DO50970
LICA
ICGC
QRTVLCHMA
DEG_APCC_DBOX_1
0.7069
p.T457S
SIDM01203
Other Solid Cancers
GDSC
QRTVLCHMA
DEG_APCC_DBOX_1
0.1389
p.T457S
SIDM00198
Ewing's Sarcoma
GDSC
QRTVLCHMA
DEG_APCC_DBOX_1
0.1389
p.R462K
SIDM00845
Burkitt's Lymphoma
GDSC
QRTVLCHMA
DEG_APCC_DBOX_1
0.2778
p.D463N
SIDM00845
Burkitt's Lymphoma
GDSC
QRTVLCHMA
DEG_APCC_DBOX_1
0.3056
p.P476S
SIDM00954
Breast Carcinoma
GDSC
QRTVLCHMA
DEG_APCC_DBOX_1
0.2222
p.A480V
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
QRTVLCHMA
DEG_APCC_DBOX_1
0.1111
p.E460K
A101D
skin
COSMIC
QRTVLCHMA
DEG_APCC_DBOX_1
0.2222
Drug responses associated with CHRD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QRTVLCHMA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H2X0
Chordin
DEG_APCC_DBOX_1
464:472
QRTVLCHMA
APC,CDC20,FZR1
0.6264
More...