DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
QRVPLWPIS
Uniprot ID:
Q8TDX9
Source protein:
Polycystic kidney disease protein 1-like 1
Source gene:
PKD1L1
Class:
DEG_APCC_DBOX_1
Location:
230:238
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9976
ASA_SCORE:
70.4889
COIL:
0.7483
CONS_SCORE:
0.4703
DSS_SCORE:
0.583
HELIX:
0.0343
FCONS_SCORE:
0.8192
RIG_SCORE:
0.7166
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S228I
TCGA-44-6777
LUAD
TCGA
QRVPLWPIS
DEG_APCC_DBOX_1
0.2778
p.S228I
DO23645
LUAD
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.2778
p.S246I
TCGA-69-A59K
LUAD
TCGA
QRVPLWPIS
DEG_APCC_DBOX_1
0.1111
p.S246I
DO45335
LUAD
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.1111
p.Q226L
TCGA-75-7031
LUAD
TCGA
QRVPLWPIS
DEG_APCC_DBOX_1
0.2222
p.Q226L
DO25545
LUAD
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.2222
p.P241S
TCGA-D3-A8GC
SKCM
TCGA
QRVPLWPIS
DEG_APCC_DBOX_1
0.25
p.P241S
DO50281
SKCM
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.25
p.Q230L
TCGA-D6-A4ZB
HNSC
TCGA
QRVPLWPIS
DEG_APCC_DBOX_1
0.6654
p.Q230L
DO44446
HNSC
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.6654
p.H239Y
TCGA-EO-A22R
UCEC
TCGA
QRVPLWPIS
DEG_APCC_DBOX_1
0.3056
p.H239Y
DO42713
UCEC
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.3056
p.P236L
TCGA-GF-A3OT
SKCM
TCGA
QRVPLWPIS
DEG_APCC_DBOX_1
0.6471
p.P236L
DO47288
SKCM
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.6471
p.P236L
SIDM01060
Melanoma
GDSC
QRVPLWPIS
DEG_APCC_DBOX_1
0.6471
p.P236L
IGR-1
skin
COSMIC
QRVPLWPIS
DEG_APCC_DBOX_1
0.6471
p.R245K
DO48398
BLCA
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.1389
p.S228R
DO229019
LICA
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.2778
p.H248Q
DO229008
LICA
ICGC
QRVPLWPIS
DEG_APCC_DBOX_1
0.0556
p.T227N
SIDM00327
Hodgkin's Lymphoma
GDSC
QRVPLWPIS
DEG_APCC_DBOX_1
0.25
p.T227N
ACH-000754
Lymphoma
CCLE
QRVPLWPIS
DEG_APCC_DBOX_1
0.25
p.T227N
L-428
haematopoietic_and_lymphoid_tissue
COSMIC
QRVPLWPIS
DEG_APCC_DBOX_1
0.25
p.A222V
SIDM01088
Endometrial Carcinoma
GDSC
QRVPLWPIS
DEG_APCC_DBOX_1
0.1111
p.A222V
ACH-000965
Endometrial/Uterine Cancer
CCLE
QRVPLWPIS
DEG_APCC_DBOX_1
0.1111
p.A222V
RL95-2
endometrium
COSMIC
QRVPLWPIS
DEG_APCC_DBOX_1
0.1111
Drug responses associated with PKD1L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QRVPLWPIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TDX9
Polycystic kidney disease protein 1-like 1
DEG_APCC_DBOX_1
230:238
QRVPLWPIS
APC,CDC20,FZR1
0.9976
More...