DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
QTSMTDFYHSKRRL
Uniprot ID:
P38936
Source protein:
Cyclin-dependent kinase inhibitor 1
Source gene:
CDKN1A
Class:
DEG_CRL4_CDT2_1
Location:
144:157
E3 ligase:
DTL
DEGRON score:
0.9982
ASA_SCORE:
97.1643
COIL:
0.7401
CONS_SCORE:
0.7101
DSS_SCORE:
0.7059
HELIX:
0.1517
FCONS_SCORE:
1.2646
RIG_SCORE:
0.7494
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R162S
TCGA-05-4427
LUAD
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.1944
p.R162S
TCGA-05-4427
LUAD
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.1944
p.R162S
DO23666
LUAD
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.1944
p.R162S
DO23666
LUAD
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.1944
p.R140Q
TCGA-13-1403
OV
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2222
p.R140Q
TCGA-13-1403
OV
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2222
p.R140Q
DO28038
OV
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2222
p.R140Q
DO28038
OV
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2222
p.R142W
TCGA-AJ-A3BH
UCEC
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2778
p.R142W
TCGA-AJ-A3BH
UCEC
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2778
p.R142W
TCGA-AX-A2HC
UCEC
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2778
p.R142W
TCGA-AX-A2HC
UCEC
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2778
p.R142W
DO41638
UCEC
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2778
p.R142W
DO41638
UCEC
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2778
p.R142W
DO41572
UCEC
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2778
p.R142W
DO41572
UCEC
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2778
p.R142W
SIDM00615
Hepatocellular Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2778
p.R142W
SIDM00615
Hepatocellular Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2778
p.R142W
ACH-000217
Liver Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2778
p.R142W
ACH-000217
Liver Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2778
p.R142W
JHH-6
liver
COSMIC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2778
p.R142W
JHH-6
liver
COSMIC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2778
p.S153C
TCGA-C5-A8YR
CESC
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.7541
p.S153C
TCGA-C5-A8YR
CESC
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.7541
p.S153C
DO49908
CESC
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.7541
p.S153C
DO49908
CESC
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.7541
p.D136H
TCGA-CF-A1HS
BLCA
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.1111
p.D136H
TCGA-CF-A1HS
BLCA
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.1111
p.D136H
DO486
BLCA
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.1111
p.D136H
DO486
BLCA
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.1111
p.D149H
TCGA-DD-A4NE
LIHC
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.7688
p.D149H
TCGA-DD-A4NE
LIHC
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.7688
p.D149H
DO44889
LIHC
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.7688
p.D149H
DO44889
LIHC
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.7688
p.R155H
TCGA-FG-A6IZ
LGG
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.8244
p.R155H
TCGA-FG-A6IZ
LGG
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.8244
p.R155H
DO44584
LGG
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.8244
p.R155H
DO44584
LGG
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.8244
p.R155H
SIDM01966
Colorectal Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.8244
p.R155H
SIDM01966
Colorectal Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.8244
p.R155H
SIDM01608
Endometrial Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.8244
p.R155H
SIDM01608
Endometrial Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.8244
p.R155H
ACH-000990
Endometrial/Uterine Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.8244
p.R155H
ACH-000990
Endometrial/Uterine Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.8244
p.G135A
TCGA-IG-A3Y9
ESCA
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.0833
p.G135A
TCGA-IG-A3Y9
ESCA
TCGA
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.0833
p.R143L
DO229018
LICA
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143L
DO229018
LICA
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.K163N
DO229006
LICA
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.6111
p.K163N
DO229006
LICA
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.6111
p.R142Q
DO220852
MELA
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.2778
p.R142Q
DO220852
MELA
ICGC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.2778
p.R156W
SIDM00131
Glioma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.7523
p.R156W
SIDM00131
Glioma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.7523
p.R156W
ACH-000329
Brain Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.7523
p.R156W
ACH-000329
Brain Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.7523
p.R156W
CCF-STTG1
central_nervous_system
COSMIC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.7523
p.R156W
CCF-STTG1
central_nervous_system
COSMIC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.7523
p.R143Q
SIDM00299
Other Sarcomas
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143Q
SIDM00299
Other Sarcomas
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.R143Q
SIDM01378
Ovarian Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143Q
SIDM01378
Ovarian Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.R143Q
SIDM01473
Plasma Cell Myeloma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143Q
SIDM01473
Plasma Cell Myeloma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.R143Q
ACH-000541
Myeloma
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143Q
ACH-000541
Myeloma
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.R143Q
ACH-000646
Ovarian Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143Q
ACH-000646
Ovarian Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.R143Q
ACH-002271
Sarcoma
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143Q
ACH-002271
Sarcoma
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.R143Q
MFH-ino
soft_tissue
COSMIC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143Q
MFH-ino
soft_tissue
COSMIC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.R143W
SIDM00999
Bladder Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143W
SIDM00999
Bladder Carcinoma
GDSC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.R143W
ACH-000973
Bladder Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143W
ACH-000973
Bladder Cancer
CCLE
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
p.R143W
639-V
urinary_tract
COSMIC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_1
0.3056
p.R143W
639-V
urinary_tract
COSMIC
QTSMTDFYHSKRRL
DEG_CRL4_CDT2_2
0.3056
Drug responses associated with CDKN1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QTSMTDFYHSKRRL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P38936
Cyclin-dependent kinase inhibitor 1
DEG_CRL4_CDT2_1
144:157
QTSMTDFYHSKRRL
DTL
0.9982
More...
P38936
Cyclin-dependent kinase inhibitor 1
DEG_CRL4_CDT2_1
144:157
QTSMTDFYHSKRRL
DTL
0.9982
More...
P38936
Cyclin-dependent kinase inhibitor 1
DEG_CRL4_CDT2_2
144:157
QTSMTDFYHSKRRL
DTL
0.9982
More...