DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RAAMFPE
Uniprot ID:
P35222
Source protein:
Catenin beta-1
Source gene:
CTNNB1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
95:101
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9802
ASA_SCORE:
82.6857
COIL:
0.4344
CONS_SCORE:
0.3891
DSS_SCORE:
0.4258
HELIX:
0.5529
FCONS_SCORE:
1.2521
RIG_SCORE:
0.7808
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R90Q
TCGA-AA-3510
COAD
TCGA
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.V94E
TCGA-AP-A1DP
UCEC
TCGA
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.3056
p.E101D
TCGA-AP-A1DV
UCEC
TCGA
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.5647
p.P100H
TCGA-D3-A2JC
SKCM
TCGA
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.6583
p.R93S
TCGA-EE-A20F
SKCM
TCGA
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.2778
p.M98V
TCGA-EW-A6SD
BRCA
TCGA
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.6097
p.R90L
TCGA-LN-A7HX
ESCA
TCGA
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.M91V
DO223936
BRCA
ICGC
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.2222
p.R86S
DO37961
SKCM
ICGC
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.5278
p.P93H
DO47578
SKCM
ICGC
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.2778
p.V87E
DO42336
UCEC
ICGC
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.1111
p.E94D
DO43186
UCEC
ICGC
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.3056
p.D108Y
SCH
stomach
COSMIC
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.1389
p.A98V
SNU-1040
large_intestine
COSMIC
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.6936
p.R107H
SNU-1040
large_intestine
COSMIC
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.1667
p.A91V
SNU-1040
large_intestine
COSMIC
RAAMFPE
LIG_APCC_ABBAyCdc20_2
0.2222
Drug responses associated with CTNNB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RAAMFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35222
Catenin beta-1
LIG_APCC_ABBAyCdc20_2
95:101
RAAMFPE
APC,CDC20,FZR1
0.9802
More...