DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RAEMYDD
Uniprot ID:
Q8IX01
Source protein:
SURP and G-patch domain-containing protein 2
Source gene:
SUGP2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
50:56
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9874
ASA_SCORE:
75.0571
COIL:
0.3904
CONS_SCORE:
0.5199
DSS_SCORE:
0.4267
HELIX:
0.5744
FCONS_SCORE:
1.0489
RIG_SCORE:
0.7344
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V57I
TCGA-AP-A056
UCEC
TCGA
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.V57I
DO43971
UCEC
ICGC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.D55N
TCGA-BS-A0TA
UCEC
TCGA
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.5821
p.D55N
DO43298
UCEC
ICGC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.5821
p.P47S
TCGA-D3-A8GL
SKCM
TCGA
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.25
p.P47S
DO50287
SKCM
ICGC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.25
p.E52K
TCGA-KQ-A41N
BLCA
TCGA
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.591
p.E52K
DO223588
BLCA
ICGC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.591
p.H58N
DO228948
LICA
ICGC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.Y63C
DO228338
MALY
ICGC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.1389
p.Y63C
ACH-002232
Lymphoma
CCLE
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.1389
p.Y63C
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.1389
p.A51T
DO33063
PACA
ICGC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.6028
p.R64T
SIDM00133
Non-Small Cell Lung Carcinoma
GDSC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.1111
p.R64T
HOP-62
lung
COSMIC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.1111
p.R50T
ACH-000861
Lung Cancer
CCLE
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.7876
p.R50T
HOP-62
lung
COSMIC
RAEMYDD
LIG_APCC_ABBAyCdc20_2
0.7876
Drug responses associated with SUGP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RAEMYDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IX01
SURP and G-patch domain-containing protein 2
LIG_APCC_ABBAyCdc20_2
50:56
RAEMYDD
APC,CDC20,FZR1
0.9874
More...