DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RAGLYGE
Uniprot ID:
P08572
Source protein:
Collagen alpha-2
Source gene:
COL4A2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1077:1083
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9915
ASA_SCORE:
77.8286
COIL:
0.8404
CONS_SCORE:
0.4739
DSS_SCORE:
0.4491
HELIX:
0.0254
FCONS_SCORE:
1.1494
RIG_SCORE:
0.7288
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1069W
TCGA-55-7995
LUAD
TCGA
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R1069W
DO45323
LUAD
ICGC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1111
p.I1093T
TCGA-B5-A3FC
UCEC
TCGA
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.0556
p.I1093T
DO41871
UCEC
ICGC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.0556
p.G1076R
TCGA-ED-A7XP
LIHC
TCGA
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.G1076R
DO48562
LIHC
ICGC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.E1083K
TCGA-FR-A3YO
SKCM
TCGA
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E1083K
DO37419
SKCM
ICGC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.7022
p.R1069L
TCGA-FS-A1ZB
SKCM
TCGA
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R1069L
DO37886
SKCM
ICGC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1111
p.D1071G
SIDM00600
Thyroid Gland Carcinoma
GDSC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.D1071G
ACH-000467
Colon/Colorectal Cancer
CCLE
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.D1071G
ACH-001528
Thyroid Cancer
CCLE
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.D1071G
HCC-56
large_intestine
COSMIC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.D1071G
IHH-4
thyroid
COSMIC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.A1086V
SIDM00842
Colorectal Carcinoma
GDSC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.25
p.G1091D
SIDM00240
Cervical Carcinoma
GDSC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1111
p.G1091D
OMC-1
cervix
COSMIC
RAGLYGE
LIG_APCC_ABBAyCdc20_2
0.1111
Drug responses associated with COL4A2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RAGLYGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P08572
Collagen alpha-2
LIG_APCC_ABBAyCdc20_2
1077:1083
RAGLYGE
APC,CDC20,FZR1
0.9915
More...