DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RAPLHPE
Uniprot ID:
Q9H078
Source protein:
Caseinolytic peptidase B protein homolog
Source gene:
CLPB
Class:
LIG_APCC_ABBAyCdc20_2
Location:
695:701
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.647
ASA_SCORE:
90.3143
COIL:
0.8206
CONS_SCORE:
0.1553
DSS_SCORE:
0.46
HELIX:
0.1516
FCONS_SCORE:
0.9386
RIG_SCORE:
0.7421
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K702N
TCGA-BR-8591
STAD
TCGA
RAPLHPE
LIG_APCC_ABBAyCdc20_2
0.3056
p.A696V
TCGA-CV-5441
HNSC
TCGA
RAPLHPE
LIG_APCC_ABBAyCdc20_2
0.5825
p.P700A
TCGA-D3-A3MV
SKCM
TCGA
RAPLHPE
LIG_APCC_ABBAyCdc20_2
0.6392
p.T706A
SIDM00773
Non-Cancerous
GDSC
RAPLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.T706A
SIDM00774
Breast Carcinoma
GDSC
RAPLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R695W
SIDM00785
Acute Myeloid Leukemia
GDSC
RAPLHPE
LIG_APCC_ABBAyCdc20_2
0.8634
p.R695W
SIDM00628
Breast Carcinoma
GDSC
RAPLHPE
LIG_APCC_ABBAyCdc20_2
0.8634
p.R695W
SIDM01752
Pancreatic Carcinoma
GDSC
RAPLHPE
LIG_APCC_ABBAyCdc20_2
0.8634
Drug responses associated with CLPB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RAPLHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H078
Caseinolytic peptidase B protein homolog
LIG_APCC_ABBAyCdc20_2
695:701
RAPLHPE
APC,CDC20,FZR1
0.647
More...