DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RDLLHNE
Uniprot ID:
Q8N684
Source protein:
Cleavage and polyadenylation specificity factor subunit 7
Source gene:
CPSF7
Class:
LIG_APCC_ABBAyCdc20_2
Location:
439:445
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9253
ASA_SCORE:
118.2571
COIL:
0.7906
CONS_SCORE:
0.4717
DSS_SCORE:
0.5858
HELIX:
0.208
FCONS_SCORE:
0.9679
RIG_SCORE:
0.5787
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I446V
TCGA-AA-3811
COAD
TCGA
RDLLHNE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R431H
SIDM00850
Gastric Carcinoma
GDSC
RDLLHNE
LIG_APCC_ABBAyCdc20_2
0.5556
p.R431H
AGS
stomach
COSMIC
RDLLHNE
LIG_APCC_ABBAyCdc20_2
0.5556
p.R454W
ACH-000508
Lung Cancer
CCLE
RDLLHNE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R454W
COR-L88
lung
COSMIC
RDLLHNE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R438W
ACH-000989
Colon/Colorectal Cancer
CCLE
RDLLHNE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R438W
SNU-175
large_intestine
COSMIC
RDLLHNE
LIG_APCC_ABBAyCdc20_2
0.3056
p.D441E
ACH-000993
Endometrial/Uterine Cancer
CCLE
RDLLHNE
LIG_APCC_ABBAyCdc20_2
0.6758
p.R447W
SNU-175
large_intestine
COSMIC
RDLLHNE
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with CPSF7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RDLLHNE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N684
Cleavage and polyadenylation specificity factor subunit 7
LIG_APCC_ABBAyCdc20_2
439:445
RDLLHNE
APC,CDC20,FZR1
0.9253
More...