DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RDPLHPE
Uniprot ID:
O75081
Source protein:
Protein CBFA2T3
Source gene:
CBFA2T3
Class:
LIG_APCC_ABBAyCdc20_2
Location:
306:312
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.917
ASA_SCORE:
92.0857
COIL:
0.8403
CONS_SCORE:
0.4532
DSS_SCORE:
0.7737
HELIX:
0.1403
FCONS_SCORE:
1.0522
RIG_SCORE:
0.5989
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R317Q
TCGA-19-5956
GBM
TCGA
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R317Q
DO13863
GBM
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R317Q
ACH-001390
Breast Cancer
CCLE
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R306S
TCGA-75-6211
LUAD
TCGA
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7427
p.R306S
DO25173
LUAD
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7427
p.R298M
TCGA-AX-A2HC
UCEC
TCGA
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R298M
DO41572
UCEC
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1111
p.G303R
TCGA-EE-A2GO
SKCM
TCGA
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.25
p.G303R
DO37823
SKCM
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.25
p.G303E
TCGA-FR-A728
SKCM
TCGA
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.25
p.R320H
DO8786
COAD
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R320H
DO227695
PACA
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R320H
DO37251
READ
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1111
p.D297N
DO222877
COCA
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.P301L
DO233768
GACA
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.P302L
DO14268
HNSC
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.2222
p.E307K
DO222402
MELA
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7022
p.R306H
DO218861
SKCA
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R306H
SIDM00957
Colorectal Carcinoma
GDSC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R306H
ACH-000350
Colon/Colorectal Cancer
CCLE
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.8244
p.A310S
DO37432
SKCM
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7588
p.R316Q
DO51774
STAD
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.3333
p.E301D
DO229224
THCA
ICGC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R306G
SIDM01120
Other Solid Cancers
GDSC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7568
p.E312K
SIDM00383
Gastric Carcinoma
GDSC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E312K
SIDM00280
Gastric Carcinoma
GDSC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E312K
SIDM00560
Gastric Carcinoma
GDSC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E312K
SIDM01709
Melanoma
GDSC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E312K
SCH
stomach
COSMIC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E312K
ECC10
stomach
COSMIC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E312K
MKN7
stomach
COSMIC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7022
p.P318S
SIDM00487
Colorectal Carcinoma
GDSC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1667
p.P318S
ACH-000963
Colon/Colorectal Cancer
CCLE
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1667
p.P318S
CCK-81
large_intestine
COSMIC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.1667
p.P311A
SIDM00324
Neuroblastoma
GDSC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.6392
p.P311A
ACH-001674
Neuroblastoma
CCLE
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.6392
p.P311A
TGW
autonomic_ganglia
COSMIC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.6392
p.H310Y
ACH-000761
Gastric Cancer
CCLE
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.L309P
ACH-000963
Colon/Colorectal Cancer
CCLE
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.7582
p.D297G
ACH-001354
Neuroblastoma
CCLE
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.I297F
DSH1
urinary_tract
COSMIC
RDPLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
Drug responses associated with CBFA2T3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RDPLHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75081
Protein CBFA2T3
LIG_APCC_ABBAyCdc20_2
306:312
RDPLHPE
APC,CDC20,FZR1
0.917
More...