DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
REDLFAE
Uniprot ID:
O60749
Source protein:
Sorting nexin-2
Source gene:
SNX2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
70:76
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8951
ASA_SCORE:
93.4143
COIL:
0.456
CONS_SCORE:
0.3412
DSS_SCORE:
0.658
HELIX:
0.5261
FCONS_SCORE:
1.0846
RIG_SCORE:
0.7666
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R70I
TCGA-AX-A2HC
UCEC
TCGA
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.8102
p.R70I
DO41572
UCEC
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.8102
p.A75V
TCGA-F7-A624
HNSC
TCGA
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.5825
p.A75V
DO44440
HNSC
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.5825
p.D69Y
DO50708
ORCA
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.3056
p.D69N
ACH-000883
Brain Cancer
CCLE
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.3056
p.D69N
SW1783
central_nervous_system
COSMIC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.3056
p.E80D
TCGA-AZ-6608
COAD
TCGA
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.2222
p.E80D
DO7954
COAD
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.2222
p.S82Y
SIDM00118
Colorectal Carcinoma
GDSC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.S82Y
ACH-001081
Colon/Colorectal Cancer
CCLE
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.S82Y
HCC2998
large_intestine
COSMIC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.L83S
TCGA-GF-A4EO
SKCM
TCGA
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1389
p.L83S
DO47559
SKCM
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1389
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Drug responses associated with SNX2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of REDLFAE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60749
Sorting nexin-2
LIG_APCC_ABBAyCdc20_2
70:76
REDLFAE
APC,CDC20,FZR1
0.8951
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