DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
REDLFAE
Uniprot ID:
O60749
Source protein:
Sorting nexin-2
Source gene:
SNX2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
70:76
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8951
ASA_SCORE:
93.4143
COIL:
0.456
CONS_SCORE:
0.3412
DSS_SCORE:
0.658
HELIX:
0.5261
FCONS_SCORE:
1.0846
RIG_SCORE:
0.7666
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R70I
TCGA-AX-A2HC
UCEC
TCGA
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.8102
p.R70I
DO41572
UCEC
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.8102
p.E80D
TCGA-AZ-6608
COAD
TCGA
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.2222
p.E80D
DO7954
COAD
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.2222
p.A75V
TCGA-F7-A624
HNSC
TCGA
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.5825
p.A75V
DO44440
HNSC
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.5825
p.L83S
TCGA-GF-A4EO
SKCM
TCGA
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1389
p.L83S
DO47559
SKCM
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1389
p.D69Y
DO50708
ORCA
ICGC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.3056
p.S82Y
SIDM00118
Colorectal Carcinoma
GDSC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.S82Y
ACH-001081
Colon/Colorectal Cancer
CCLE
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.S82Y
HCC2998
large_intestine
COSMIC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.D69N
ACH-000883
Brain Cancer
CCLE
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.3056
p.D69N
SW1783
central_nervous_system
COSMIC
REDLFAE
LIG_APCC_ABBAyCdc20_2
0.3056
Drug responses associated with SNX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of REDLFAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60749
Sorting nexin-2
LIG_APCC_ABBAyCdc20_2
70:76
REDLFAE
APC,CDC20,FZR1
0.8951
More...