DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
REMLFED
Uniprot ID:
Q6PCB5
Source protein:
Lysine-specific demethylase RSBN1L
Source gene:
RSBN1L
Class:
LIG_APCC_ABBAyCdc20_2
Location:
560:566
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8302
ASA_SCORE:
70.7
COIL:
0.3571
CONS_SCORE:
0.7822
DSS_SCORE:
0.541
HELIX:
0.5641
FCONS_SCORE:
1.0983
RIG_SCORE:
0.764
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R560C
TCGA-19-1790
GBM
TCGA
REMLFED
LIG_APCC_ABBAyCdc20_2
0.8301
p.R560C
DO12328
GBM
ICGC
REMLFED
LIG_APCC_ABBAyCdc20_2
0.8301
p.R555Q
TCGA-56-8307
LUSC
TCGA
REMLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.R555Q
TCGA-AP-A056
UCEC
TCGA
REMLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.R555Q
TCGA-B5-A3FA
UCEC
TCGA
REMLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.R555Q
DO219139
LUSC
ICGC
REMLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.R555Q
DO52402
UCEC
ICGC
REMLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.R555Q
DO43971
UCEC
ICGC
REMLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.H571Y
TCGA-FW-A3R5
SKCM
TCGA
REMLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.H571Y
DO37406
SKCM
ICGC
REMLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.T568A
DO222762
COCA
ICGC
REMLFED
LIG_APCC_ABBAyCdc20_2
0.2778
p.R569T
SIDM00744
Non-Small Cell Lung Carcinoma
GDSC
REMLFED
LIG_APCC_ABBAyCdc20_2
0.25
p.R569T
ACH-000893
Lung Cancer
CCLE
REMLFED
LIG_APCC_ABBAyCdc20_2
0.25
p.R569T
NCI-H1651
lung
COSMIC
REMLFED
LIG_APCC_ABBAyCdc20_2
0.25
Drug responses associated with RSBN1L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of REMLFED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PCB5
Lysine-specific demethylase RSBN1L
LIG_APCC_ABBAyCdc20_2
560:566
REMLFED
APC,CDC20,FZR1
0.8302
More...