DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
REPVFSE
Uniprot ID:
Q8N3I7
Source protein:
Bardet-Biedl syndrome 5 protein
Source gene:
BBS5
Class:
LIG_APCC_ABBAyCdc20_2
Location:
312:318
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9077
ASA_SCORE:
75.7857
COIL:
0.8063
CONS_SCORE:
0.5304
DSS_SCORE:
0.3859
HELIX:
0.0283
FCONS_SCORE:
0.941
RIG_SCORE:
0.8189
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R312C
TCGA-B5-A11N
UCEC
TCGA
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R312C
TCGA-BS-A0UF
UCEC
TCGA
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R312C
TCGA-EI-6917
READ
TCGA
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R312C
TCGA-EO-A22U
UCEC
TCGA
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.8301
p.I324V
TCGA-DI-A1BU
UCEC
TCGA
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.1667
p.E315K
DO838
BLCA
ICGC
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.7022
p.F303Y
DO233215
GACA
ICGC
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.A302E
DO233728
GACA
ICGC
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.Y302C
DO48677
LIRI
ICGC
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.S324L
DO25957
LUAD
ICGC
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.1667
p.P321H
DO220185
SARC
ICGC
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.25
p.I303V
DO42023
UCEC
ICGC
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.G309E
NCI-H1876
lung
COSMIC
REPVFSE
LIG_APCC_ABBAyCdc20_2
0.25
Drug responses associated with BBS5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of REPVFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N3I7
Bardet-Biedl syndrome 5 protein
LIG_APCC_ABBAyCdc20_2
312:318
REPVFSE
APC,CDC20,FZR1
0.9077
More...