DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RFAVHGD
Uniprot ID:
O94811
Source protein:
Tubulin polymerization-promoting protein
Source gene:
TPPP
Class:
LIG_APCC_ABBAyCdc20_2
Location:
57:63
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7253
ASA_SCORE:
48.9286
COIL:
0.3936
CONS_SCORE:
0.5838
DSS_SCORE:
0.3458
HELIX:
0.5956
FCONS_SCORE:
1.1895
RIG_SCORE:
0.7797
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L48F
TCGA-99-7458
LUAD
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.0833
p.L48F
DO25416
LUAD
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.0833
p.A66T
TCGA-AP-A059
UCEC
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.A66T
DO50809
LIRI
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.A66T
DO41361
UCEC
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.A54T
TCGA-CG-5721
STAD
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.A54T
DO38192
STAD
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.A50V
TCGA-CM-5861
COAD
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.1389
p.A50V
DO7918
COAD
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.1389
p.E70K
TCGA-EE-A29E
SKCM
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.1389
p.E70K
DO37831
SKCM
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.1389
p.A64V
TCGA-EE-A2MU
SKCM
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.A64V
DO37436
SKCM
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.H72Y
TCGA-IB-7651
PAAD
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.0833
p.H72Y
DO46657
PAAD
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.0833
p.G73D
TCGA-QF-A5YS
UCEC
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.0556
p.G73D
DO52426
UCEC
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R56Q
TCGA-VQ-A8DT
STAD
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R56Q
DO51751
STAD
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.H72N
TCGA-WQ-AB4B
LIHC
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.0833
p.H72N
DO52327
LIHC
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.0833
p.A64T
TCGA-XF-AAMF
BLCA
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.A64T
DO51930
BLCA
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.A64T
SIDM00493
Other Solid Cancers
GDSC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.A64T
NCI-H292
lung
COSMIC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G62R
TCGA-ZN-A9VU
MESO
TCGA
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.6457
p.G73S
DO50442
ESAD
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.0556
p.A66D
DO228978
LICA
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.R56L
DO232761
PBCA
ICGC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R65S
SIDM00388
B-Cell Non-Hodgkin's Lymphoma
GDSC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R65S
ACH-002272
Lymphoma
CCLE
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R65S
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.2778
p.V60M
SIDM00783
Colorectal Carcinoma
GDSC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.6097
p.V60M
ACH-000971
Colon/Colorectal Cancer
CCLE
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.6097
p.V60M
HCT-116
large_intestine
COSMIC
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.6097
p.D63N
ACH-000984
Endometrial/Uterine Cancer
CCLE
RFAVHGD
LIG_APCC_ABBAyCdc20_2
0.6932
Drug responses associated with TPPP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RFAVHGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94811
Tubulin polymerization-promoting protein
LIG_APCC_ABBAyCdc20_2
57:63
RFAVHGD
APC,CDC20,FZR1
0.7253
More...