DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RGELFWD
Uniprot ID:
P10253
Source protein:
Lysosomal alpha-glucosidase
Source gene:
GAA
Class:
LIG_APCC_ABBAyCdc20_2
Location:
854:860
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8263
ASA_SCORE:
30.2143
COIL:
0.0719
CONS_SCORE:
0.5035
DSS_SCORE:
0.3165
HELIX:
0.0057
FCONS_SCORE:
1.4716
RIG_SCORE:
0.8093
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R870Q
TCGA-GD-A6C6
BLCA
TCGA
RGELFWD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R870Q
DO48504
BLCA
ICGC
RGELFWD
LIG_APCC_ABBAyCdc20_2
0.0556
p.D861N
DO228976
LICA
ICGC
RGELFWD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R870L
DO228976
LICA
ICGC
RGELFWD
LIG_APCC_ABBAyCdc20_2
0.0556
p.G850V
DO229015
LICA
ICGC
RGELFWD
LIG_APCC_ABBAyCdc20_2
0.2222
p.G862V
DO232838
NACA
ICGC
RGELFWD
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with GAA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGELFWD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10253
Lysosomal alpha-glucosidase
LIG_APCC_ABBAyCdc20_2
854:860
RGELFWD
APC,CDC20,FZR1
0.8263
More...