DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RGELYDD
Uniprot ID:
O75563
Source protein:
Src kinase-associated phosphoprotein 2
Source gene:
SKAP2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
233:239
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9967
ASA_SCORE:
71.1857
COIL:
0.6751
CONS_SCORE:
0.5349
DSS_SCORE:
0.5829
HELIX:
0.2221
FCONS_SCORE:
1.1068
RIG_SCORE:
0.7306
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H242L
TCGA-44-7670
LUAD
TCGA
RGELYDD
LIG_APCC_ABBAyCdc20_2
0.25
p.E228K
TCGA-AC-A23H
BRCA
TCGA
RGELYDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.Y230C
TCGA-BC-A5W4
LIHC
TCGA
RGELYDD
LIG_APCC_ABBAyCdc20_2
0.25
p.P245L
TCGA-GN-A4U4
SKCM
TCGA
RGELYDD
LIG_APCC_ABBAyCdc20_2
0.1667
p.D231N
SIDM00686
Endometrial Carcinoma
GDSC
RGELYDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.D231N
ACH-000293
Endometrial/Uterine Cancer
CCLE
RGELYDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.D231N
KLE
endometrium
COSMIC
RGELYDD
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with SKAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGELYDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75563
Src kinase-associated phosphoprotein 2
LIG_APCC_ABBAyCdc20_2
233:239
RGELYDD
APC,CDC20,FZR1
0.9967
More...