DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RGGLFED
Uniprot ID:
Q9ULI4
Source protein:
Kinesin-like protein KIF26A
Source gene:
KIF26A
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1235:1241
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9918
ASA_SCORE:
78.7429
COIL:
0.8421
CONS_SCORE:
0.3293
DSS_SCORE:
0.499
HELIX:
0.0477
FCONS_SCORE:
1.1025
RIG_SCORE:
0.7065
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1226G
TCGA-DK-AA6T
BLCA
TCGA
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.A1226G
DO51872
BLCA
ICGC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.R1227H
TCGA-GV-A3JX
BLCA
TCGA
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.1111
p.R1227H
DO448
BLCA
ICGC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.1111
p.R1227H
DO7340
CLLE
ICGC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.1111
p.R1227H
DO227604
PACA
ICGC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.1111
p.A1226T
TCGA-IB-7651
PAAD
TCGA
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.A1226T
DO46657
PAAD
ICGC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.R1227G
TCGA-XF-AAMX
BLCA
TCGA
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.1111
p.R1227G
DO51939
BLCA
ICGC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.1111
p.S1231N
DO23174
LINC
ICGC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.6667
p.P1233T
DO50712
ORCA
ICGC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.2778
p.R1235C
SIDM01962
Colorectal Carcinoma
GDSC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.8301
p.C1250Y
SIDM00339
Non-Small Cell Lung Carcinoma
GDSC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.C1250Y
ACH-000787
Lung Cancer
CCLE
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.C1250Y
LXF-289
lung
COSMIC
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.C1225Y
ACH-002511
Skin Cancer
CCLE
RGGLFED
LIG_APCC_ABBAyCdc20_2
0.0556
Drug responses associated with KIF26A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGGLFED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULI4
Kinesin-like protein KIF26A
LIG_APCC_ABBAyCdc20_2
1235:1241
RGGLFED
APC,CDC20,FZR1
0.9918
More...