DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RGILHTD
Uniprot ID:
Q15678
Source protein:
Tyrosine-protein phosphatase non-receptor type 14
Source gene:
PTPN14
Class:
LIG_APCC_ABBAyCdc20_2
Location:
454:460
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9854
ASA_SCORE:
93.2286
COIL:
0.8006
CONS_SCORE:
0.2781
DSS_SCORE:
0.5212
HELIX:
0.125
FCONS_SCORE:
0.7723
RIG_SCORE:
0.7523
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N470S
TCGA-12-0818
GBM
TCGA
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.0556
p.N470S
DO12892
GBM
ICGC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R454M
TCGA-61-2611
OV
TCGA
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.8632
p.R454M
DO28641
OV
ICGC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.8632
p.L457M
TCGA-AX-A2HG
UCEC
TCGA
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.5999
p.L457M
DO41337
UCEC
ICGC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.5999
p.S465F
TCGA-AZ-6600
COAD
TCGA
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.6389
p.S465F
DO10774
COAD
ICGC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.6389
p.R450H
TCGA-EI-6882
READ
TCGA
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R450H
DO36531
READ
ICGC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R454W
TCGA-EO-A22R
UCEC
TCGA
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.8634
p.R454W
DO42713
UCEC
ICGC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.8634
p.G455R
DO223503
CLLE
ICGC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.6457
p.L469I
DO228253
MALY
ICGC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.0833
p.T459A
SIDM00631
Breast Carcinoma
GDSC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.6028
p.T459A
ACH-001358
Breast Cancer
CCLE
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.6028
p.T459A
MDA-MB-330
breast
COSMIC
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.6028
p.R450L
ACH-001750
Sarcoma
CCLE
RGILHTD
LIG_APCC_ABBAyCdc20_2
0.2222
Drug responses associated with PTPN14 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGILHTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15678
Tyrosine-protein phosphatase non-receptor type 14
LIG_APCC_ABBAyCdc20_2
454:460
RGILHTD
APC,CDC20,FZR1
0.9854
More...