DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RGLIHRE
Uniprot ID:
P16452
Source protein:
Protein 4.2
Source gene:
EPB42
Class:
LIG_APCC_ABBAyCdc20_2
Location:
628:634
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9336
ASA_SCORE:
71.3286
COIL:
0.7353
CONS_SCORE:
0.6989
DSS_SCORE:
0.0929
HELIX:
0.1074
FCONS_SCORE:
1.1917
RIG_SCORE:
0.8071
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P633L
TCGA-EE-A29D
SKCM
TCGA
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.7582
p.P644S
DO230311
COCA
ICGC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R640H
DO13462
GBM
ICGC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R638K
DO38783
STAD
ICGC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.2222
p.S636N
DO43971
UCEC
ICGC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.2778
p.H619Q
SIDM00933
Breast Carcinoma
GDSC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0833
p.H619Q
SIDM00855
Other Sarcomas
GDSC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0833
p.H619Q
SIDM00875
Breast Carcinoma
GDSC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0833
p.H619Q
SIDM00844
Burkitt's Lymphoma
GDSC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0833
p.H619Q
SIDM00721
Small Cell Lung Carcinoma
GDSC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0833
p.H619Q
SIDM01752
Pancreatic Carcinoma
GDSC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0833
p.A628V
SIDM00643
Non-Cancerous
GDSC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.6936
p.E629G
SIDM01049
Non-Cancerous
GDSC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.7199
p.E629G
EHEB
haematopoietic_and_lymphoid_tissue
COSMIC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.7199
p.M624I
SIDM01780
B-Cell Non-Hodgkin's Lymphoma
GDSC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.2222
p.W643C
ACH-000672
Lung Cancer
CCLE
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0833
p.W643C
IA-LM
lung
COSMIC
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0833
p.M618I
ACH-000761
Gastric Cancer
CCLE
RGLIHRE
LIG_APCC_ABBAyCdc20_2
0.0556
Drug responses associated with EPB42 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGLIHRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16452
Protein 4.2
LIG_APCC_ABBAyCdc20_2
628:634
RGLIHRE
APC,CDC20,FZR1
0.9336
More...