DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RGNLFGE
Uniprot ID:
O75592
Source protein:
E3 ubiquitin-protein ligase MYCBP2
Source gene:
MYCBP2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
3220:3226
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9615
ASA_SCORE:
78.2286
COIL:
0.6009
CONS_SCORE:
0.668
DSS_SCORE:
0.4763
HELIX:
0.3234
FCONS_SCORE:
1.2747
RIG_SCORE:
0.721
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V3214M
TCGA-2W-A8YY
CESC
TCGA
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.2778
p.V3214M
DO223732
CESC
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.2778
p.S3236I
TCGA-43-2581
LUSC
TCGA
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.0556
p.S3236I
DO26602
LUSC
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.0556
p.Y3216D
TCGA-DD-AAD8
LIHC
TCGA
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.2222
p.Y3216D
DO52226
LIHC
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.2222
p.R3227Q
TCGA-DF-A2KU
UCEC
TCGA
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R3227Q
DO222919
BTCA
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R3227Q
DO223286
UCEC
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.P3223Q
TCGA-EE-A2GR
SKCM
TCGA
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.7035
p.P3223Q
DO37996
SKCM
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.7035
p.A3229T
TCGA-HU-A4GT
STAD
TCGA
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.25
p.A3229T
DO48020
STAD
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.25
p.Q3232K
DO228952
LICA
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.H3217N
DO229015
LICA
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.25
p.P3213T
DO229037
LICA
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.1389
p.G3226D
DO232224
PBCA
ICGC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.7198
p.G3221D
SIDM00422
Hodgkin's Lymphoma
GDSC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.6087
p.G3225R
SIDM00663
Melanoma
GDSC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.6457
p.K3212E
SIDM01116
Non-Small Cell Lung Carcinoma
GDSC
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.2222
p.A3221V
ACH-000898
Gastric Cancer
CCLE
RGNLFGE
LIG_APCC_ABBAyCdc20_2
0.6936
Drug responses associated with MYCBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGNLFGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75592
E3 ubiquitin-protein ligase MYCBP2
LIG_APCC_ABBAyCdc20_2
3220:3226
RGNLFGE
APC,CDC20,FZR1
0.9615
More...