DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RGNVFGE
Uniprot ID:
Q1MSJ5
Source protein:
Centrosome and spindle pole-associated protein 1
Source gene:
CSPP1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
751:757
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9939
ASA_SCORE:
89.0714
COIL:
0.9163
CONS_SCORE:
0.463
DSS_SCORE:
0.6007
HELIX:
0.0466
FCONS_SCORE:
1.0326
RIG_SCORE:
0.6423
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K746N
TCGA-06-5416
GBM
TCGA
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1944
p.K746N
TCGA-AA-A010
COAD
TCGA
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1944
p.K746N
TCGA-AX-A0J0
UCEC
TCGA
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1944
p.K746N
DO10880
GBM
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1944
p.K746N
DO41133
UCEC
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R767W
TCGA-A2-A0EQ
BRCA
TCGA
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R767W
TCGA-A6-6653
COAD
TCGA
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R767W
DO4773
BRCA
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R767W
DO10373
COAD
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R767W
DO233687
GACA
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R756I
TCGA-A5-A0G2
UCEC
TCGA
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.8102
p.R756I
DO41235
UCEC
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.8102
p.E750Q
TCGA-A6-5660
COAD
TCGA
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.E750Q
DO7972
COAD
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.A760V
TCGA-EO-A3AZ
UCEC
TCGA
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.25
p.A760V
DO50078
UCEC
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.25
p.R754Q
DO222864
COCA
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.7329
p.E765K
DO50736
LICA
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.5556
p.E750A
DO220876
MELA
ICGC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.K763N
SIDM00193
Colorectal Carcinoma
GDSC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.K763N
ACH-000991
Colon/Colorectal Cancer
CCLE
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.K763N
SNU-81
large_intestine
COSMIC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.I743N
SIDM01133
Other Solid Cancers
GDSC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1111
p.I743N
NCI-H835
lung
COSMIC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R750C
LS-180
large_intestine
COSMIC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.S742L
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R750H
CW-2
large_intestine
COSMIC
RGNVFGE
LIG_APCC_ABBAyCdc20_2
0.3056
Drug responses associated with CSPP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGNVFGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q1MSJ5
Centrosome and spindle pole-associated protein 1
LIG_APCC_ABBAyCdc20_2
751:757
RGNVFGE
APC,CDC20,FZR1
0.9939
More...