DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RGPVFVD
Uniprot ID:
Q0VFZ6
Source protein:
Protein CFAP210
Source gene:
CFAP210
Class:
LIG_APCC_ABBAyCdc20_2
Location:
505:511
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9908
ASA_SCORE:
72.6
COIL:
0.7129
CONS_SCORE:
0.402
DSS_SCORE:
0.5305
HELIX:
0.0344
FCONS_SCORE:
0.8256
RIG_SCORE:
0.7466
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A521T
TCGA-63-A5MB
LUSC
TCGA
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.0556
p.A521T
DO52018
LUSC
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.0556
p.G506A
TCGA-AC-A5XS
BRCA
TCGA
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.6429
p.G506A
DO50023
BRCA
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.6429
p.A521V
TCGA-B5-A3FA
UCEC
TCGA
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.0556
p.A521V
DO52402
UCEC
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.0556
p.G506E
TCGA-BF-AAP4
SKCM
TCGA
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.6087
p.G506E
DO219468
SKCM
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.6087
p.R512I
TCGA-EO-A22R
UCEC
TCGA
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R512I
DO42713
UCEC
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G514E
TCGA-WE-A8K5
SKCM
TCGA
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.25
p.G514E
DO51282
SKCM
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.25
p.R512T
TCGA-ZF-AA51
BLCA
TCGA
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R512T
DO219093
BLCA
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.3056
p.D511N
DO50337
ESAD
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.6932
p.P501H
DO229037
LICA
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.Q520E
DO221545
PACA
ICGC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.0833
p.P501S
SIDM00672
Hepatocellular Carcinoma
GDSC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.P501S
SIDM00694
Other Solid Cancers
GDSC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.P501S
SIDM00878
Breast Carcinoma
GDSC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.P501S
SIDM00493
Other Solid Cancers
GDSC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.P501S
SIDM00048
Non-Small Cell Lung Carcinoma
GDSC
RGPVFVD
LIG_APCC_ABBAyCdc20_2
0.2222
Drug responses associated with CFAP210 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGPVFVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q0VFZ6
Protein CFAP210
LIG_APCC_ABBAyCdc20_2
505:511
RGPVFVD
APC,CDC20,FZR1
0.9908
More...