DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RGSIFEE
Uniprot ID:
P48552
Source protein:
Nuclear receptor-interacting protein 1
Source gene:
NRIP1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
401:407
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9365
ASA_SCORE:
102.6
COIL:
0.9219
CONS_SCORE:
0.5308
DSS_SCORE:
0.6805
HELIX:
0.0447
FCONS_SCORE:
0.8901
RIG_SCORE:
0.6273
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P411T
TCGA-27-2518
GBM
TCGA
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.2222
p.P411T
DO13773
GBM
ICGC
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.2222
p.M393I
TCGA-63-A5MG
LUSC
TCGA
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.1111
p.M393I
DO52019
LUSC
ICGC
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.1111
p.S403R
TCGA-BS-A0UV
UCEC
TCGA
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.6316
p.S403R
DO42793
UCEC
ICGC
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.6316
p.T413N
TCGA-EO-A22X
UCEC
TCGA
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.1667
p.T413N
DO43907
UCEC
ICGC
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.1667
p.P392T
DO229022
LICA
ICGC
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R401S
DO231658
LINC
ICGC
RGSIFEE
LIG_APCC_ABBAyCdc20_2
0.7427
Drug responses associated with NRIP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGSIFEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48552
Nuclear receptor-interacting protein 1
LIG_APCC_ABBAyCdc20_2
401:407
RGSIFEE
APC,CDC20,FZR1
0.9365
More...