DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RGTLFED
Uniprot ID:
O14815
Source protein:
Calpain-9
Source gene:
CAPN9
Class:
LIG_APCC_ABBAyCdc20_2
Location:
39:45
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9846
ASA_SCORE:
59.4714
COIL:
0.7461
CONS_SCORE:
0.662
DSS_SCORE:
0.4256
HELIX:
0.0821
FCONS_SCORE:
1.0798
RIG_SCORE:
0.7807
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E30Q
TCGA-05-4397
LUAD
TCGA
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.E30Q
DO25320
LUAD
ICGC
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.S51N
TCGA-BG-A222
UCEC
TCGA
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.1667
p.S51N
DO42977
UCEC
ICGC
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.1667
p.L37R
TCGA-L5-A8NG
ESCA
TCGA
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.2778
p.A46S
DO229019
LICA
ICGC
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.3056
p.E30D
DO229015
LICA
ICGC
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.0833
p.F48S
ACH-000008
Skin Cancer
CCLE
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.25
p.F48S
ACH-000202
Colon/Colorectal Cancer
CCLE
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.25
p.F48S
ACH-001024
Skin Cancer
CCLE
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.25
p.F48S
ACH-002120
Skin Cancer
CCLE
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.25
p.G40V
ACH-001863
Bile Duct Cancer
CCLE
RGTLFED
LIG_APCC_ABBAyCdc20_2
0.6421
Drug responses associated with CAPN9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGTLFED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14815
Calpain-9
LIG_APCC_ABBAyCdc20_2
39:45
RGTLFED
APC,CDC20,FZR1
0.9846
More...