DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RHSLYVD
Uniprot ID:
P12644
Source protein:
Bone morphogenetic protein 4
Source gene:
BMP4
Class:
LIG_APCC_ABBAyCdc20_2
Location:
310:316
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9029
ASA_SCORE:
71.1143
COIL:
0.4517
CONS_SCORE:
0.794
DSS_SCORE:
0.2836
HELIX:
0.0676
FCONS_SCORE:
1.2508
RIG_SCORE:
0.8155
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R310C
TCGA-14-0867
GBM
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.8301
p.R310C
DO11675
GBM
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.8301
p.K304N
TCGA-22-5481
LUSC
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.2778
p.K304N
DO27160
LUSC
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R300W
TCGA-91-7771
LUAD
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R300W
DO25807
LUAD
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R309L
TCGA-BA-A6DA
HNSC
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R309L
DO44448
HNSC
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.3056
p.D319N
TCGA-BS-A0UF
UCEC
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.25
p.D319N
TCGA-E6-A1LX
UCEC
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.25
p.D319N
DO41020
UCEC
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.25
p.D319N
DO41488
UCEC
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.25
p.D319N
SIDM00583
Pancreatic Carcinoma
GDSC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.25
p.D319N
ACH-000164
Pancreatic Cancer
CCLE
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.25
p.D319N
ACH-001107
Pancreatic Cancer
CCLE
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.25
p.D319N
KP-1N
pancreas
COSMIC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.25
p.R309Q
TCGA-CM-4743
COAD
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R309Q
DO8103
COAD
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R310H
TCGA-D1-A103
UCEC
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.8244
p.R310H
DO42312
UCEC
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.8244
p.V315A
TCGA-DF-A2KU
UCEC
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.5825
p.V315A
DO223286
UCEC
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.5825
p.W322L
TCGA-EE-A3AC
SKCM
TCGA
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.1667
p.W322L
DO37631
SKCM
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.1667
p.N323D
DO224756
LAML
ICGC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.1389
p.S318N
SIDM00721
Small Cell Lung Carcinoma
GDSC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.2778
p.S318N
ACH-002171
Lung Cancer
CCLE
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.2778
p.S318N
NCI-H250
lung
COSMIC
RHSLYVD
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with BMP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RHSLYVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12644
Bone morphogenetic protein 4
LIG_APCC_ABBAyCdc20_2
310:316
RHSLYVD
APC,CDC20,FZR1
0.9029
More...