DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RHYLHPE
Uniprot ID:
Q5T5Y3
Source protein:
Calmodulin-regulated spectrin-associated protein 1
Source gene:
CAMSAP1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
397:403
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9506
ASA_SCORE:
101
COIL:
0.8163
CONS_SCORE:
0.3836
DSS_SCORE:
0.4899
HELIX:
0.1096
FCONS_SCORE:
1.004
RIG_SCORE:
0.704
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V388M
TCGA-53-7626
LUAD
TCGA
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
SIDM00889
Cervical Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
SIDM00351
Oral Cavity Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
ACH-001333
Cervical Cancer
CCLE
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
ACH-002029
Head and Neck Cancer
CCLE
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
SAS
upper_aerodigestive_tract
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
C-33-A
cervix
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.Y410C
DO228901
LICA
ICGC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.25
p.V399M
DO23774
LUAD
ICGC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.7208
p.V399M
C-33-A
cervix
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.7208
p.V399M
SAS
upper_aerodigestive_tract
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.7208
p.Y399H
SIDM00656
Burkitt's Lymphoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00529
Breast Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM01039
Other Solid Cancers
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00878
Breast Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00493
Other Solid Cancers
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00048
Non-Small Cell Lung Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00641
Burkitt's Lymphoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.L408P
SIDM00333
Endometrial Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.L408P
MFE-319
endometrium
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.A397T
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.7139
p.A388S
LS-411N
large_intestine
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
Drug responses associated with CAMSAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RHYLHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T5Y3
Calmodulin-regulated spectrin-associated protein 1
LIG_APCC_ABBAyCdc20_2
397:403
RHYLHPE
APC,CDC20,FZR1
0.9506
More...