DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RHYLHPE
Uniprot ID:
Q5T5Y3
Source protein:
Calmodulin-regulated spectrin-associated protein 1
Source gene:
CAMSAP1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
397:403
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9506
ASA_SCORE:
101
COIL:
0.8163
CONS_SCORE:
0.3836
DSS_SCORE:
0.4899
HELIX:
0.1096
FCONS_SCORE:
1.004
RIG_SCORE:
0.704
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V399M
DO23774
LUAD
ICGC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.7208
p.V399M
C-33-A
cervix
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.7208
p.V399M
SAS
upper_aerodigestive_tract
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.7208
p.A397T
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.7139
p.Y399H
SIDM00656
Burkitt's Lymphoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00529
Breast Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM01039
Other Solid Cancers
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00878
Breast Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00493
Other Solid Cancers
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00048
Non-Small Cell Lung Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y399H
SIDM00641
Burkitt's Lymphoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.6118
p.Y410C
DO228901
LICA
ICGC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.25
p.L408P
SIDM00333
Endometrial Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.L408P
MFE-319
endometrium
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.V388M
TCGA-53-7626
LUAD
TCGA
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
SIDM00889
Cervical Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
SIDM00351
Oral Cavity Carcinoma
GDSC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
ACH-001333
Cervical Cancer
CCLE
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
ACH-002029
Head and Neck Cancer
CCLE
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
SAS
upper_aerodigestive_tract
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V388M
C-33-A
cervix
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.A388S
LS-411N
large_intestine
COSMIC
RHYLHPE
LIG_APCC_ABBAyCdc20_2
0.0833
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Drug responses associated with CAMSAP1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of RHYLHPE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T5Y3
Calmodulin-regulated spectrin-associated protein 1
LIG_APCC_ABBAyCdc20_2
397:403
RHYLHPE
APC,CDC20,FZR1
0.9506
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