DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RIFLFEE
Uniprot ID:
Q58EX7
Source protein:
Puratrophin-1
Source gene:
PLEKHG4
Class:
LIG_APCC_ABBAyCdc20_2
Location:
945:951
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7077
ASA_SCORE:
43.3
COIL:
0.3371
CONS_SCORE:
0.7912
DSS_SCORE:
0.0587
HELIX:
0.0271
FCONS_SCORE:
1.4375
RIG_SCORE:
0.952
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R945H
TCGA-2W-A8YY
CESC
TCGA
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R945H
DO223732
CESC
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R939C
TCGA-BH-A18S
BRCA
TCGA
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R936C
TCGA-BR-4368
STAD
TCGA
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R936C
DO38715
STAD
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R944C
DO230309
COCA
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R959H
DO233884
GACA
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.1111
p.V943L
DO228976
LICA
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.2778
p.A958S
DO229015
LICA
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.1389
p.Q948L
DO24140
LUAD
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.7765
p.S942F
DO220900
MELA
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.25
p.R956C
DO223286
UCEC
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R956C
SU-DHL-10
haematopoietic_and_lymphoid_tissue
COSMIC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R956H
DO52402
UCEC
ICGC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R936H
SIDM01263
T-Lymphoblastic Leukemia
GDSC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.0833
p.F949L
SIDM00760
Small Cell Lung Carcinoma
GDSC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.6981
p.F949L
ACH-000729
Lung Cancer
CCLE
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.6981
p.F949L
NCI-H1963
lung
COSMIC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.6981
p.A939T
SK-UT-1
soft_tissue
COSMIC
RIFLFEE
LIG_APCC_ABBAyCdc20_2
0.1667
Drug responses associated with PLEKHG4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RIFLFEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q58EX7
Puratrophin-1
LIG_APCC_ABBAyCdc20_2
945:951
RIFLFEE
APC,CDC20,FZR1
0.7077
More...